RNA–Protein interactions for RNA: ENST00000556422.5

TMEM260-210, Transcript of transmembrane protein 260, humanhuman

TSL 1 (best)

Gene TMEM260, Length 3,864 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-210ENST00000556422 GADD45AP24522 165 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 GCGRP47871 477 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MGAT2Q10469 447 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 FZD5Q13467 585 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C1orf61Q13536 156 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TATDN3Q17R31 274 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF181Q2M3W8 571 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NKAIN1Q4KMZ8 207 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 PABPC1L2AQ5JQF8 200 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 ENTPD8Q5MY95 495 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 MFSD4AQ8N468 514 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C9orf62Q8N4C0 152 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 GLYATL2Q8WU03 294 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 RAB1CQ92928 201 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 DVL3Q92997 716 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 TMEM203Q969S6 136 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 LRRC46Q96FV0 321 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 LRRC61Q9BV99 259 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 GGACTQ9BVM4 153 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 GPR174Q9BXC1 333 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 NKX6-2Q9C056 277 aaPredicted RBP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 C3orf14Q9HBI5 128 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP4.63□□□□□ -1.67
TMEM260-210ENST00000556422 STARD5Q9NSY2 213 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 HRASLS2Q9NWW9 162 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 DNAJC27Q9NZQ0 273 aa4.63□□□□□ -1.67
TMEM260-210ENST00000556422 KIR2DS5A0A0G2JLQ3 304 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 A0A0G2JNG1 304 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 A0A0J9YY10 115 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 A0A1W2PPC4 97 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 A6NIZ1 184 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FAM74A7A6NL05 159 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 KLRC4-KLRK1H3BQV0 150 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 KIR2DS3K7RE56 304 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PDCD5O14737 125 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 GALR3O60755 368 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 UPK1BO75841 260 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TNFP01375 233 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 RPLP1P05386 114 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ST6GAL1P15907 406 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF136P52737 540 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 GAS1P54826 345 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CDK5Q00535 292 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 IFITM3Q01628 133 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 KIR2DS5Q14953 304 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SSX1Q16384 188 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 MAPK14Q16539 360 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PRICKLE4Q2TBC4 344 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FAM74A3Q4VXF1 159 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PLAG1Q6DJT9 500 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DGAT2L6Q6ZPD8 337 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 MED25Q71SY5 747 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FGD2Q7Z6J4 655 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TRIM48Q8IWZ4 208 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 OR4K14Q8NGD5 310 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 C1orf216Q8TAB5 229 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZDHHC1Q8WTX9 485 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SPSB4Q96A44 273 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CTHRC1Q96CG8 243 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 RAB3CQ96E17 227 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SPATA5L1Q9BVQ7 753 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FNDC11Q9BVV2 318 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 EGLN3Q9H6Z9 239 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 NIPAL2Q9H841 368 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ZNF160Q9HCG1 818 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 LYRM4Q9HD34 91 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FLVCR2Q9UPI3 526 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FARSAQ9Y285 508 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 ENTPD2Q9Y5L3 495 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 URGCP-MRPS24S4R325 110 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 UNC13CQ8NB66 2214 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CPSF4LA6NMK7 179 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 EFCAB9A8MZ26 197 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 TGFBR3LH3BV60 316 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DSCR3O14972 297 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 MBTPS2O43462 519 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 B3GALT2O43825 422 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 MPZL2O60487 215 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SAP30O75446 220 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 WNT1P04628 370 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CD5P06127 495 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 UBCP0CG48 685 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 MUC1P15941 1255 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 RPS4Y1P22090 263 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 IGFBP4P22692 258 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 S100A11P31949 105 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 GZMKP49863 264 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 NOVA1P51513 510 aaKnown RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SHC2P98077 582 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 HHEXQ03014 270 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SERTAD2Q14140 314 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CCDC85BQ15834 202 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 DEFB110Q30KQ9 67 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SYT14P1Q58G82 188 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 CLLU1Q5K131 121 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 FAM74A1Q5RGS3 127 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SYT13Q7L8C5 426 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 BHLHA15Q7RTS1 189 aaPredicted RBP4.62□□□□□ -1.67
TMEM260-210ENST00000556422 SLC16A14Q7RTX9 510 aa4.62□□□□□ -1.67
TMEM260-210ENST00000556422 PRICKLE2Q7Z3G6 844 aa4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms