RNA–Protein interactions for RNA: ENST00000556399.5

ARHGEF40-207, Transcript of Rho guanine nucleotide exchange factor 40, humanhuman

TSL 1 (best)

Gene ARHGEF40, Length 4,902 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40-207ENST00000556399 NAXDQ8IW45 347 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNRGQ8N5I3 272 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 NUDCD2Q8WVJ2 157 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 CXorf58Q96LI9 332 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 CRB3Q9BUF7 120 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 FANCFQ9NPI8 374 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 MTFP1Q9UDX5 166 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC17A4Q9Y2C5 497 aa13.67□□□□□ -0.22
ARHGEF40-207ENST00000556399 A0A087WUJ7 227 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 RPS10-NUDT3A0A1W2PQS6 291 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 ANKRD20A5PA0PJZ0 165 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR6C68A6NDL8 312 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 BCL2L11O43521 198 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 AQP8O94778 261 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 RPS10P46783 165 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 CRYBA2P53672 197 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 EEF1A1P68104 462 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 ALKBH2Q6NS38 261 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 LILRA6Q6PI73 481 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TSEN54Q7Z6J9 526 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 SPIN2AQ99865 258 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 SPIN2BQ9BPZ2 258 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 EXOSC3Q9NQT5 275 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 FBXO4Q9UKT5 387 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 SIRT4Q9Y6E7 314 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 NUDT21O43809 227 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 CISD3P0C7P0 127 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 CNR1P21554 472 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 ZIC1Q15915 447 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 CDONQ4KMG0 1287 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 RTL6Q6ICC9 239 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR13H1Q8NG92 308 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 C10orf90Q96M02 699 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 CTDSPLO15194 276 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 MFGE8Q08431 387 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 BAMBIQ13145 260 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 GPR157Q5UAW9 335 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 BPHLQ86WA6 291 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNJ15Q99712 375 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 C1QTNF6Q9BXI9 259 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 NXF5Q9H1B4 397 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 MCCC2Q9HCC0 563 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 FAM86C1Q9NVL1 165 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 SLC17A2O00624 439 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 S100PP25815 95 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 NKX6-1P78426 367 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNAB1Q14722 419 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMEM164Q5U3C3 297 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TMEM81Q6P7N7 255 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 KIAA0907Q7Z7F0 614 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 C14orf79Q96F83 325 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TINAGL1Q9GZM7 467 aaPredicted RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 FKRPQ9H9S5 495 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TAF9BQ9HBM6 251 aa13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 DHCR7Q9UBM7 475 aaKnown RBP13.66□□□□□ -0.22
ARHGEF40-207ENST00000556399 TDRD15B5MCY1 1934 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 CSNK1A1P48729 337 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 SSBP1Q04837 148 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 HMGN3Q15651 99 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 PAN3Q58A45 887 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 TRAF4Q9BUZ4 470 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 OR10A2Q9H208 303 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 PCYT1BQ9Y5K3 369 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 CCDC88CQ9P219 2028 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 HSPB2A8KAH6 182 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 CHRM2P08172 466 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 ST6GAL1P15907 406 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 NAT1P18440 290 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 PPP2CBP62714 309 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 PPP2CAP67775 309 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 HSPB2Q16082 182 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 LYG2Q86SG7 212 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 SIGLEC11Q96RL6 698 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 BANF2Q9H503 90 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 PUS1Q9Y606 427 aaKnown RBP eCLIP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 TNFRSF10CO14798 259 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 SHOXO15266 292 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 IFNA1P01562 189 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 FCGR2AP12318 317 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 KLF9Q13886 244 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 EXOSC6Q5RKV6 272 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 BAP18Q8IXM2 172 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 COX14Q96I36 57 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 NKX3-1Q99801 234 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 GHITMQ9H3K2 345 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 HAO2Q9NYQ3 351 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 KCNS2Q9ULS6 477 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 OGG1O15527 345 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 SEC14L5O43304 696 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 NKX2-2O95096 273 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 CPN1P15169 458 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 DHPSP49366 369 aaPredicted RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 AFF3P51826 1226 aaKnown RBP13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 GPR137CQ8N3F9 429 aa13.65□□□□□ -0.22
ARHGEF40-207ENST00000556399 ANK1P16157 1881 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 NSA2O95478 260 aaKnown RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 SLC2A1P11166 492 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 HOXB9P17482 250 aaPredicted RBP13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 HRH1P35367 487 aa13.64□□□□□ -0.23
ARHGEF40-207ENST00000556399 CX3CR1P49238 355 aa13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms