RNA–Protein interactions for RNA: ENST00000555905.5

TMEM260-208, Transcript of transmembrane protein 260, humanhuman

TSL 5

Gene TMEM260, Length 766 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM260-208ENST00000555905 CIB4A0PJX0 185 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 C12orf71A8MTZ7 269 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 RNF223E7ERA6 249 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 SEC14L2O76054 403 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 MT-ND2P03891 347 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 SCG5P05408 212 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ITGA5P08648 1049 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 HTR1AP08908 422 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 CST2P09228 141 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 B4GALT1P15291 398 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 GNLYP22749 145 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 IGHV1-2P23083 117 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 HCCSP53701 268 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 PCBD1P61457 104 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 GUCA2AQ02747 115 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 MVKQ03426 396 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 EIF2B1Q14232 305 aaKnown RBP9.69□□□□□ -0.86
TMEM260-208ENST00000555905 IGFBP7Q16270 282 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 PCK2Q16822 640 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 SOWAHCQ53LP3 525 aaPredicted RBP9.69□□□□□ -0.86
TMEM260-208ENST00000555905 RNLSQ5VYX0 342 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 OTPQ5XKR4 325 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ANKRD16Q6P6B7 361 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 KLHL24Q6TFL4 600 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 NCCRP1Q6ZVX7 275 aaPredicted RBP9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF627Q7L945 461 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 DPY19L4Q7Z388 723 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 MRGPRGQ86SM5 289 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 LUZP2Q86TE4 346 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 LRRC18Q8N456 261 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 OTOSQ8NHW6 89 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 SMAP2Q8WU79 429 aaPredicted RBP9.69□□□□□ -0.86
TMEM260-208ENST00000555905 THEM6Q8WUY1 208 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ASB17Q8WXJ9 295 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF416Q9BWM5 594 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 MND1Q9BWT6 205 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 MRPS26Q9BYN8 205 aaKnown RBP9.69□□□□□ -0.86
TMEM260-208ENST00000555905 ERVK13-1Q9NX77 482 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 GALNT8Q9NY28 637 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 COQ3Q9NZJ6 369 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 SCOCQ9UIL1 159 aa9.69□□□□□ -0.86
TMEM260-208ENST00000555905 POLEQ07864 2286 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 A0A096LPE4 126 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 A0A1W2PPZ6 126 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 MYL12BO14950 172 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 LRRTM2O43300 516 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ATP6V1B1P15313 513 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ALOX5APP20292 161 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 COX5AP20674 150 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 CHRNB4P30926 498 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 HOXC12P31275 282 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 RPS27P42677 84 aaKnown RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ETV1P50549 477 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 FOXG1P55316 489 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ACTA2P62736 377 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ACTG2P63267 376 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 TUBA4AP68366 448 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 AQP6Q13520 282 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 GALEQ14376 348 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SLC36A2Q495M3 483 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 C4orf17Q53FE4 359 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 OR7E24Q6IFN5 339 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 KCTD18Q6PI47 426 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 TMPRSS11AQ6ZMR5 421 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SLC16A14Q7RTX9 510 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 DCXRQ7Z4W1 244 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 DPPA2Q7Z7J5 298 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 LHFPL3Q86UP9 236 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 CXorf67Q86X51 503 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 LINC00346Q8IVM7 164 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 CCDC36Q8IYA8 594 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SPARTQ8N0X7 666 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 GABRG1Q8N1C3 465 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 KLHL36Q8N4N3 616 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ZNF433Q8N7K0 673 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 C1orf162Q8NEQ5 155 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 GJC3Q8NFK1 279 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 OR1K1Q8NGR3 316 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SNX33Q8WV41 574 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ASB5Q8WWX0 329 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 NANOS1Q8WY41 292 aaKnown RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 HTRA1Q92743 480 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SIGLEC11Q96RL6 698 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 SH3GL3Q99963 347 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 WACQ9BTA9 647 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ALG8Q9BVK2 526 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 C1orf198Q9H425 327 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 ASH2LQ9UBL3 628 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 CYB5R1Q9UHQ9 305 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 GDF2Q9UK05 429 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 LHFPL6Q9Y693 200 aa9.68□□□□□ -0.86
TMEM260-208ENST00000555905 KMT2BQ9UMN6 2715 aaPredicted RBP9.68□□□□□ -0.86
TMEM260-208ENST00000555905 TMEM129A0AVI4 362 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 A8MXE2 369 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 RAD51DO75771 328 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 LYZL6O75951 148 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 CLPTM1O96005 669 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 ADRA2AP08913 450 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 LIMS3P0CW19 117 aa9.67□□□□□ -0.86
TMEM260-208ENST00000555905 LIMS4P0CW20 117 aa9.67□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms