RNA–Protein interactions for RNA: ENST00000555890.5

SLIRP-204, Transcript of SRA stem-loop interacting RNA binding protein, humanhuman

TSL 2

Gene SLIRP, Length 471 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SLIRP-204ENST00000555890 RPL27P61353 136 aaKnown RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 RPS18P62269 152 aaKnown RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ACTA2P62736 377 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 RAP1AP62834 184 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ACTG2P63267 376 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 FOXF1Q12946 379 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 PLPPR5Q32ZL2 321 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 FAM205BPQ63HN1 556 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 BICRALQ6AI39 1079 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 JMJD6Q6NYC1 403 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ARSKQ6UWY0 536 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 B3GLCTQ6Y288 498 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 H1FNTQ75WM6 255 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 FAM122BQ7Z309 247 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 EGFL6Q8IUX8 553 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 SLC35F2Q8IXU6 374 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 TMEM99Q8N816 258 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 FADS6Q8N9I5 356 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 SCAIQ8N9R8 606 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF485Q8NCK3 441 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ATP6V1C2Q8NEY4 427 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 OR6Q1Q8NGQ2 317 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 HAVCR2Q8TDQ0 301 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 SLC25A43Q8WUT9 341 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 RASD2Q96D21 266 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ZMYND19Q96E35 227 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 KCTD7Q96MP8 289 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 TSPAN32Q96QS1 320 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 SNX18Q96RF0 628 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 MNTQ99583 582 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 TBX5Q99593 518 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 CENPOQ9BU64 300 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 PTDSS2Q9BVG9 487 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 OR11A1Q9GZK7 315 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 TXNIPQ9H3M7 391 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 CHST11Q9NPF2 352 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 RPRD1BQ9NQG5 326 aaKnown RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 SACM1LQ9NTJ5 587 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ASB6Q9NWX5 421 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 P4HTMQ9NXG6 502 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ABI3Q9P2A4 366 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 CRNNQ9UBG3 495 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 TEKT2Q9UIF3 430 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 FBXL4Q9UKA2 621 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ZNF346Q9UL40 294 aaKnown RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 PEX16Q9Y5Y5 336 aa6.09□□□□□ -1.43
SLIRP-204ENST00000555890 CHCHD2Q9Y6H1 151 aaPredicted RBP6.09□□□□□ -1.43
SLIRP-204ENST00000555890 ABCA4P78363 2273 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 A0A1W2PQL4 384 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 METTL15A6NJ78 407 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 NPIPB13A6NJU9 1138 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 CENPBD1B2RD01 187 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 NPIPB4C9JG80 1138 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 NPIPA5E9PKD4 350 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 STMND1H3BQB6 276 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 J3QLW9 94 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PLPP3O14495 311 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PHYHO14832 338 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SEC14L5O43304 696 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ARHGEF9O43307 516 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 CBR3O75828 277 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 IL1AP01583 271 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 IGHMP01871 453 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 P04436 131 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TACSTD2P09758 323 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 GAAP10253 952 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF19P17023 458 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 CELP19835 753 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TNFSF4P23510 183 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 F8A1P23610 371 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 CD82P27701 267 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 FGF9P31371 208 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ACVR1BP36896 505 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 DAP3P51398 398 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 RORCP51449 518 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 BMXP51813 675 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 GBX2P52951 348 aaPredicted RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 RPS25P62851 125 aaKnown RBP6.08□□□□□ -1.44
SLIRP-204ENST00000555890 DEFA6Q01524 100 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ZNF85Q03923 595 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SELENBP1Q13228 472 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 OR7A5Q15622 319 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 ACKR1Q16570 336 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 C3orf36Q3SXR2 165 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PRAMEF20Q5VT98 475 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 H3F3CQ6NXT2 135 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 C3orf33Q6P1S2 294 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 TUBA3EQ6PEY2 450 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 C16orf87Q6PH81 154 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 DNM1P34Q6PK57 102 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PLEKHG7Q6ZR37 379 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SLC16A9Q7RTY1 509 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 KCTD20Q7Z5Y7 419 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 GHDCQ8N2G8 530 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 SYS1Q8N2H4 156 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 MS4A15Q8N5U1 240 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 OR51L1Q8NGJ5 315 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 OR1J4Q8NGS1 313 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 OR6K6Q8NGW6 343 aa6.08□□□□□ -1.44
SLIRP-204ENST00000555890 PAQR8Q8TEZ7 354 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms