RNA–Protein interactions for RNA: ENST00000555634.5

SHMT2-220, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 964 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-220ENST00000555634 RNF121Q9H920 327 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 MARCH7Q9H992 704 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 FGF20Q9NP95 211 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 OBP2BQ9NPH6 170 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 MRPS18AQ9NVS2 196 aaKnown RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 AASSQ9UDR5 926 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ERRFI1Q9UJM3 462 aaPredicted RBP9.86□□□□□ -0.83
SHMT2-220ENST00000555634 IKZF2Q9UKS7 526 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 SLC5A6Q9Y289 635 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 AMDHD2Q9Y303 409 aa9.86□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF878C9JN71 531 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 LRRTM2O43300 516 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 RAD51DO75771 328 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 SEC14L2O76054 403 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 APOL3O95236 402 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 PTHP01270 115 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 APOC1P02654 83 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 HOXB1P14653 301 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 COX5AP20674 150 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 HSD11B1P28845 292 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 CDAP32320 146 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 ARF1P84077 181 aaKnown RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 EGR3Q06889 387 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 TBCEQ15813 527 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 ETFDHQ16134 617 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 KCNMB1Q16558 191 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 TEX30Q5JUR7 227 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 PHYHD1Q5SRE7 291 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 FAM27BQ5VT28 67 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 BHLHA15Q7RTS1 189 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 DPY19L4Q7Z388 723 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 KRT77Q7Z794 578 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 SYT9Q86SS6 491 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 P2RY8Q86VZ1 359 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 TIGD4Q8IY51 512 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF511Q8NB15 262 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 OR1K1Q8NGR3 316 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 OR52N5Q8NH56 324 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 OTOSQ8NHW6 89 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 THEM6Q8WUY1 208 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 C11orf40Q8WZ69 217 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 GGHQ92820 318 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 MUCL1Q96DR8 90 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 TBX5Q99593 518 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 ALG8Q9BVK2 526 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 JAM3Q9BX67 310 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 MRPS26Q9BYN8 205 aaKnown RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 HDHD2Q9H0R4 259 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 ASH2LQ9UBL3 628 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 EXOGQ9Y2C4 368 aaKnown RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 PCDHGB5Q9Y5G0 923 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 NCOA6Q14686 2063 aaPredicted RBP9.85□□□□□ -0.83
SHMT2-220ENST00000555634 NAV2Q8IVL1 2488 aa9.85□□□□□ -0.83
SHMT2-220ENST00000555634 SMG1Q96Q15 3661 aaKnown RBP9.84□□□□□ -0.83
SHMT2-220ENST00000555634 IQCMA0A1B0GVH7 501 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 DOK2O60496 412 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 LYZL6O75951 148 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 IGHA1P01876 353 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 MT-ND5P03915 603 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 PRB1P04280 392 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 H2BFMP0C1H6 154 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 CD79AP11912 226 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 PPP3CBP16298 524 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 AGAP20933 346 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 IGHV1-2P23083 117 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 CD79BP40259 229 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 PEX19P40855 299 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 TAS2R43P59537 309 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 GRB2P62993 217 aaKnown RBP9.84□□□□□ -0.83
SHMT2-220ENST00000555634 ECH1Q13011 328 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 RAB35Q15286 201 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 MEP1BQ16820 701 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 GSG1Q2KHT4 349 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF829Q3KNS6 432 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-220ENST00000555634 LINC01590Q5TEZ4 76 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 XKRXQ6PP77 449 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF627Q7L945 461 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 DCXRQ7Z4W1 244 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 CXorf67Q86X51 503 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-220ENST00000555634 CDC20BQ86Y33 519 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 GABRG1Q8N1C3 465 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF610Q8N9Z0 462 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 OR4F15Q8NGB8 312 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 SPTSSAQ969W0 71 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 CCDC120Q96HB5 630 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 BBC3Q96PG8 261 aaPredicted RBP9.84□□□□□ -0.83
SHMT2-220ENST00000555634 ZNF416Q9BWM5 594 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 DUSP21Q9H596 190 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 NIPAL2Q9H841 368 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 EMC7Q9NPA0 242 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 KCNJ16Q9NPI9 418 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 TRIM36Q9NQ86 728 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 FKBP14Q9NWM8 211 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 PLEK2Q9NYT0 353 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 GNG8Q9UK08 70 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 UGT2A1Q9Y4X1 527 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 TIMM10BQ9Y5J6 103 aa9.84□□□□□ -0.83
SHMT2-220ENST00000555634 A0A096LPE4 126 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 IGKV1D-43A0A0B4J1Z2 117 aa9.83□□□□□ -0.84
SHMT2-220ENST00000555634 A0A1W2PPZ6 126 aa9.83□□□□□ -0.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms