RNA–Protein interactions for RNA: ENST00000555402.1

VRK1-205, Transcript of vaccinia related kinase 1, humanhuman

TSL 3

Gene VRK1, Length 415 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK1-205ENST00000555402 OR8K3Q8NH51 312 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 CD300LFQ8TDQ1 290 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 EEF1AKMT3Q96AZ1 226 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 C8orf44Q96CB5 159 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 DNAJC1Q96KC8 554 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 XPO6Q96QU8 1125 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 MRPL37Q9BZE1 423 aaKnown RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 XKR8Q9H6D3 395 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 DMAP1Q9NPF5 467 aaPredicted RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 PDP1Q9P0J1 537 aaPredicted RBP3.57□□□□□ -1.84
VRK1-205ENST00000555402 TBC1D24Q9ULP9 559 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 SLC17A4Q9Y2C5 497 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 STK38LQ9Y2H1 464 aa3.57□□□□□ -1.84
VRK1-205ENST00000555402 LYRM9A8MSI8 78 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 GOLGA8TH3BQL2 631 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 FABP3P05413 133 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 CCNB1P14635 433 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 MAS1LP35410 378 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 DEKP35659 375 aaKnown RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 CYB561P49447 251 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 HADHBP55084 474 aaKnown RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 PON3Q15166 354 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 PSMD5Q16401 504 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 PTPN20Q4JDL3 420 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 ZNF658BQ4V348 819 aaPredicted RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 FBXO48Q5FWF7 155 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 XKR4Q5GH76 650 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 MBOAT1Q6ZNC8 495 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 MICU2Q8IYU8 434 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 TTC29Q8NA56 475 aaPredicted RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 MDS2Q8NDY4 140 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 DUS3LQ96G46 650 aaKnown RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 FAM210BQ96KR6 192 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 TAAR1Q96RJ0 339 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 NEUROG2Q9H2A3 272 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 BEX1Q9HBH7 125 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 TMEM165Q9HC07 324 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 RETNQ9HD89 108 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 ZNF331Q9NQX6 463 aaPredicted RBP3.56□□□□□ -1.84
VRK1-205ENST00000555402 CD84Q9UIB8 345 aa3.56□□□□□ -1.84
VRK1-205ENST00000555402 SCN2AQ99250 2005 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 KBTBD11-OT1A0A1B0GTJ5 212 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 SPECC1L-ADORA2AF8WAN1 911 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 NUPL2O15504 423 aaKnown RBP3.55□□□□□ -1.84
VRK1-205ENST00000555402 SS18L1O75177 396 aaPredicted RBP3.55□□□□□ -1.84
VRK1-205ENST00000555402 FKBP6O75344 327 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 RAB3DO95716 219 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 GNAO1P09471 354 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 HOXA9P31269 272 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 BMI1P35226 326 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 UBE2AP49459 152 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 CSNK1EP49674 416 aaKnown RBP3.55□□□□□ -1.84
VRK1-205ENST00000555402 CRISP1P54107 249 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 CRISP3P54108 245 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 CARD18P57730 90 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 PAX5Q02548 391 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 MXD1Q05195 221 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 ILKQ13418 452 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 SYCP1Q15431 976 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 HSDL1Q3SXM5 330 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 TEX43Q6ZNM6 134 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 HDDC2Q7Z4H3 204 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 TMEM150AQ86TG1 271 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 LRRC58Q96CX6 371 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 ELOVL6Q9H5J4 265 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 CLN8Q9UBY8 286 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 ST3GAL6Q9Y274 331 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 PRG3Q9Y2Y8 225 aaPredicted RBP3.55□□□□□ -1.84
VRK1-205ENST00000555402 COMMD3-BMI1R4GMX3 469 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 LTBP1Q14766 1721 aa3.55□□□□□ -1.84
VRK1-205ENST00000555402 MAPK8IP3Q9UPT6 1336 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 IGLV11-55A0A075B6I3 123 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 IGHV3-64DA0A0J9YX35 117 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 A0A1B0GTQ1 180 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 A0A1B0GW55 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 PLAC8L1A1L4L8 177 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 TMX2-CTNND1H3BSU7 103 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 RNF113AO15541 343 aaKnown RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 CD5LO43866 347 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 CLDN11O75508 207 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 IGLV2-23P01705 113 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 CCDC172P0C7W6 258 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L2P0CJ85 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L3P0CJ86 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L5P0CJ88 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L6P0CJ89 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L7P0CJ90 424 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 PSG2P11465 335 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 F2RP25116 425 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 NUP62P37198 522 aaPredicted RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 RPS5P46782 204 aaKnown RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 DNAJC3Q13217 504 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 TRAM2Q15035 370 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 OR7A5Q15622 319 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 RSPO1Q2MKA7 263 aaPredicted RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 HES5Q5TA89 166 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 SPECC1LQ69YQ0 1117 aa3.54□□□□□ -1.84
VRK1-205ENST00000555402 TTC19Q6DKK2 380 aaPredicted RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 DUX4L9Q6RFH8 374 aaPredicted RBP3.54□□□□□ -1.84
VRK1-205ENST00000555402 SLC34A3Q8N130 599 aa3.54□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms