RNA–Protein interactions for RNA: ENST00000555221.3

CKS1BP1-201, Transcript of CDC28 protein kinase regulatory subunit 1B pseudogene 1, humanhuman

BASIC

Gene CKS1BP1, Length 240 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1BP1-201ENST00000555221 SAMSN1Q9NSI8 373 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 PITPNC1Q9UKF7 332 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 GOLT1BQ9Y3E0 138 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 F11RQ9Y624 299 aaKnown RBP3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 SYNMO15061 1565 aa3.53□□□□□ -1.84
CKS1BP1-201ENST00000555221 SETD1AO15047 1707 aaKnown RBP3.53□□□□□ -1.85
CKS1BP1-201ENST00000555221 ADAMTS13Q76LX8 1427 aa3.53□□□□□ -1.85
CKS1BP1-201ENST00000555221 YTHDC2Q9H6S0 1430 aaKnown RBP3.53□□□□□ -1.85
CKS1BP1-201ENST00000555221 NSD2O96028 1365 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CEMIPQ8WUJ3 1361 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 TMEM131LA2VDJ0 1609 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 MAP3K15Q6ZN16 1313 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 KIF1BO60333 1816 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 SS18L1O75177 396 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CLIC3O95833 236 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ANXA5P08758 320 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF30P17039 623 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 HOXA9P31269 272 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 TMED10P49755 219 aaKnown RBP3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CRISP3P54108 245 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 RGS8P57771 180 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ACTA2P62736 377 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ACTG2P63267 376 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ACTC1P68032 377 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ACTA1P68133 377 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CAPRIN1Q14444 709 aaKnown RBP3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 LINC00173Q6ZV60 143 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 HSD17B11Q8NBQ5 300 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC7A13Q8TCU3 470 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 GIMAP1Q8WWP7 306 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 PKNOX2Q96KN3 472 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 TAAR1Q96RJ0 339 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC29A1Q99808 456 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 ZNF160Q9HCG1 818 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 UXTQ9UBK9 157 aaPredicted RBP3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CD84Q9UIB8 345 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 CEP152O94986 1710 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 UBR1Q8IWV7 1749 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 SIGLEC1Q9BZZ2 1709 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 MYOM2P54296 1465 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 E9PCH4 1651 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 IQGAP1P46940 1657 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 TECPR2O15040 1411 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 PIK3C2GO75747 1445 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 PIK3C2BO00750 1634 aa3.52□□□□□ -1.85
CKS1BP1-201ENST00000555221 JCADQ9P266 1359 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 NINLQ9Y2I6 1382 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SETBP1Q9Y6X0 1596 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 LRRC7Q96NW7 1537 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SPHKAPQ2M3C7 1700 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 IGLV11-55A0A075B6I3 123 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 F6UB75 175 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 DFNA5O60443 496 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 TSPAN13O95857 204 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 EIF2S2P20042 333 aaKnown RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 AZU1P20160 251 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 OMGP23515 440 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SYKP43405 635 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 CDKN1BP46527 198 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 RFX3P48380 749 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 UBE2AP49459 152 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 NCBP2P52298 156 aaKnown RBP eCLIP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 C21orf59P57076 290 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 RAB10P61026 200 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 HERVK_113P61574 105 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 NUTF2P61970 127 aaKnown RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 MECOMQ03112 1051 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 TWF1Q12792 350 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 TCP10Q12799 353 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 LYPD2Q6UXB3 125 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 ABHD13Q7L211 337 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 STRADAQ7RTN6 431 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SLC16A14Q7RTX9 510 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 Q8N9L7 120 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 FAM81AQ8TBF8 368 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 LKAAEAR1Q8TD35 194 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SRSF12Q8WXF0 261 aaKnown RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 LRRC58Q96CX6 371 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 SDHCQ99643 169 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 C20orf24Q9BUV8 137 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 MRPL37Q9BZE1 423 aaKnown RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 TMEM185BQ9H7F4 350 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 GPATCH2LQ9NWQ4 482 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 KIAA1257Q9ULG3 409 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 ADGRL3Q9HAR2 1447 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 COL16A1Q07092 1604 aaPredicted RBP3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 STRCQ7RTU9 1775 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 ARHGEF10O15013 1369 aa3.51□□□□□ -1.85
CKS1BP1-201ENST00000555221 NRXN1Q9ULB1 1477 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 SCN2AQ99250 2005 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 GLYATL1P3A0A0U1RQE8 302 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 OR2AG2A6NM03 316 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 HIDE1A8MVS5 230 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 SIRPB1O00241 398 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 KMOO15229 486 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 ICOSLGO75144 302 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 CDH16O75309 829 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 CLPXO76031 633 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 H6PDO95479 791 aa3.5□□□□□ -1.85
CKS1BP1-201ENST00000555221 IGLV2-23P01705 113 aa3.5□□□□□ -1.85
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms