RNA–Protein interactions for RNA: ENST00000555213.1

SHMT2-218, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 3

Gene SHMT2, Length 611 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-218ENST00000555213 OR4F15Q8NGB8 312 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 OR9Q1Q8NGQ5 310 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 OR1K1Q8NGR3 316 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 LINC01560Q8TB33 94 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 NANOS1Q8WY41 292 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 MYDGFQ969H8 173 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 MUL1Q969V5 352 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 NMD3Q96D46 503 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 ZC3HAV1LQ96H79 300 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 TMEM80Q96HE8 168 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 PLEKHA8Q96JA3 519 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 SNX18Q96RF0 628 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 KCNK17Q96T54 332 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 MRPL13Q9BYD1 178 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 PRRG3Q9BZD7 231 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 RBM38Q9H0Z9 239 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 CCNB1IP1Q9NPC3 277 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 VSX1Q9NZR4 365 aaPredicted RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 CRIM1Q9NZV1 1036 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 DIMT1Q9UNQ2 313 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 AMDHD2Q9Y303 409 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 LSM2Q9Y333 95 aaKnown RBP9.57□□□□□ -0.88
SHMT2-218ENST00000555213 ICE1Q9Y2F5 2266 aa9.57□□□□□ -0.88
SHMT2-218ENST00000555213 SLC22A23A1A5C7 686 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 PRSS37A4D1T9 235 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 H7C1C5 153 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 DHHO43323 396 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SEC14L2O76054 403 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 RENP00797 406 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 PTHP01270 115 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 IGHA1P01876 353 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 LCKP06239 509 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 LIMS3P0CW19 117 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 LIMS4P0CW20 117 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 EPXP11678 715 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 B4GALT1P15291 398 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF3P17036 446 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SPI1P17947 270 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 CAPZA2P47755 286 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ETV1P50549 477 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 LCN6P62502 163 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ARF1P84077 181 aaKnown RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 RAB40BQ12829 278 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 PPA1Q15181 289 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 GABRA6Q16445 453 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 HIST3H3Q16695 136 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 KLHL22Q53GT1 634 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SYT6Q5T7P8 510 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ALKBH2Q6NS38 261 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ZNF813Q6ZN06 617 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 LINGO2Q7L985 606 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SHFQ7M4L6 423 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ZBTB46Q86UZ6 589 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 WFDC8Q8IUA0 241 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 CCDC36Q8IYA8 594 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 NANOGP1Q8N7R0 232 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 OR51L1Q8NGJ5 315 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SMAP2Q8WU79 429 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 MCHR2Q969V1 340 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 MARVELD3Q96A59 401 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 WFIKKN1Q96NZ8 548 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 FOXB1Q99853 325 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 JAM3Q9BX67 310 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 NUAK2Q9H093 628 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 OR51V1Q9H2C8 321 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 ADGRL4Q9HBW9 690 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 SRA1Q9HD15 236 aaKnown RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 H2AFY2Q9P0M6 372 aaPredicted RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 WARS2Q9UGM6 360 aaKnown RBP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP9.56□□□□□ -0.88
SHMT2-218ENST00000555213 B9D1Q9UPM9 204 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 CEPT1Q9Y6K0 416 aa9.56□□□□□ -0.88
SHMT2-218ENST00000555213 A0A096LPE4 126 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 IGLV1-36A0A0B4J1U3 117 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 IGKV1D-43A0A0B4J1Z2 117 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 A0A1W2PPZ6 126 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 FAM171A2A8MVW0 826 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 TFP02787 698 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 SBK2P0C263 348 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 HOXB1P14653 301 aaPredicted RBP9.55□□□□□ -0.88
SHMT2-218ENST00000555213 NPR2P20594 1047 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 COL8A1P27658 744 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 DCKP27707 260 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 CRABP1P29762 137 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 PYCR1P32322 319 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 HCCSP53701 268 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 FMODQ06828 376 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 GGTLC2Q14390 218 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 RAB39AQ14964 217 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 TAB1Q15750 504 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 NEDD8Q15843 81 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 ETFDHQ16134 617 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 TBRG1Q3YBR2 411 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 NRN1LQ496H8 165 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 HIKESHIQ53FT3 197 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 KLHL12Q53G59 568 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 PHYHD1Q5SRE7 291 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 C10orf128Q5T292 105 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 LRFN4Q6PJG9 635 aa9.55□□□□□ -0.88
SHMT2-218ENST00000555213 LYPD4Q6UWN0 246 aa9.55□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms