RNA–Protein interactions for RNA: ENST00000554995.1

PSEN1-211, Transcript of presenilin 1, humanhuman

TSL 2

Gene PSEN1, Length 592 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSEN1-211ENST00000554995 SUMF2Q8NBJ7 301 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 INO80EQ8NBZ0 244 aaPredicted RBP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 NPBQ8NG41 125 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 OR5T3Q8NGG3 340 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CT45A3Q8NHU0 189 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 NAT6Q93015 286 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 DNAJC1Q96KC8 554 aaKnown RBP3.8□□□□□ -1.8
PSEN1-211ENST00000554995 C9orf72Q96LT7 481 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 TMEM38AQ9H6F2 299 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 CTPS2Q9NRF8 586 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 ST3GAL6Q9Y274 331 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 HEBP2Q9Y5Z4 205 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 SYNJ1O43426 1573 aa3.8□□□□□ -1.8
PSEN1-211ENST00000554995 PRSS37A4D1T9 235 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 H7C0C1 242 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 K7EMT4 169 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 PEX7O00628 323 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 TRAF3IP2O43734 574 aaPredicted RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 SPOPO43791 374 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 HBE1P02100 147 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 ARG1P05089 322 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 S100A9P06702 114 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 STAG3L2P0CL84 134 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 LYZP61626 148 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 GNB2P62879 340 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 DAZ2Q13117 558 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 ZSCAN26Q16670 478 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 TRMT5Q32P41 509 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 COA6Q5JTJ3 125 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 CCNJQ5T5M9 372 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 AADACL4Q5VUY2 407 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 GPR107Q5VW38 600 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 RSBN1Q5VWQ0 802 aaPredicted RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 COX15Q7KZN9 410 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MRPL21Q7Z2W9 205 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 ZFP41Q8N8Y5 198 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 DCAF4L2Q8NA75 395 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 CCDC54Q8NEL0 328 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MCOLN3Q8TDD5 553 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 PIH1D2Q8WWB5 315 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 FAM3DQ96BQ1 224 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 IMMP1LQ96LU5 166 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 COL21A1Q96P44 957 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 CSPG4P5Q96PW8 444 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MRPL37Q9BZE1 423 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 ZC4H2Q9NQZ6 224 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 DYRK4Q9NR20 520 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 DAZ3Q9NR90 486 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MMP26Q9NRE1 261 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 TRAPPC4Q9Y296 219 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MRPS18BQ9Y676 258 aaKnown RBP3.79□□□□□ -1.8
PSEN1-211ENST00000554995 TOP2BQ02880 1626 aa3.79□□□□□ -1.8
PSEN1-211ENST00000554995 MAPK8IP3Q9UPT6 1336 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 TSPOAP1O95153 1857 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 A0A0J9YYE9 177 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 A0A1B0GUH1 482 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 XKRYO14609 159 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 FLOT1O75955 427 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 AQP8O94778 261 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 LSM8O95777 96 aaKnown RBP3.78□□□□□ -1.8
PSEN1-211ENST00000554995 ACTL6AO96019 429 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 IGKV3-15P01624 115 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 TRBC1P01850 177 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 KRT16P08779 473 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 TPM1P09493 284 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 NR2C1P13056 603 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 BMI1P35226 326 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 RND2P52198 227 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 GABRA6Q16445 453 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 HNRNPA1L2Q32P51 320 aaKnown RBP3.78□□□□□ -1.8
PSEN1-211ENST00000554995 ANKRD22Q5VYY1 191 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 OAFQ86UD1 273 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 MYOCDQ8IZQ8 938 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 MREGQ8N565 214 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 MITD1Q8WV92 249 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 RAB1CQ92928 201 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 APH1AQ96BI3 265 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 DNAJC19Q96DA6 116 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 PRSS16Q9NQE7 514 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 CLN6Q9NWW5 311 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 SLC25A37Q9NYZ2 338 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 YARS2Q9Y2Z4 477 aaKnown RBP3.78□□□□□ -1.8
PSEN1-211ENST00000554995 COMMD3-BMI1R4GMX3 469 aa3.78□□□□□ -1.8
PSEN1-211ENST00000554995 KIF21BO75037 1637 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 NEURL4Q96JN8 1562 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 CENPJQ9HC77 1338 aaPredicted RBP3.77□□□□□ -1.81
PSEN1-211ENST00000554995 LOC100653049A0A140TA62 436 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 CIB4A0PJX0 185 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 TSPAN11A1L157 253 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 PES1O00541 588 aaKnown RBP3.77□□□□□ -1.81
PSEN1-211ENST00000554995 KMOO15229 486 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 RAD51CO43502 376 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 CHMP2AO43633 222 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 KRT34O76011 436 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 FARS2O95363 451 aaKnown RBP3.77□□□□□ -1.81
PSEN1-211ENST00000554995 INSP01308 110 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 UBTFL6P0CB48 400 aaPredicted RBP3.77□□□□□ -1.81
PSEN1-211ENST00000554995 SMIM10L1P0DMW3 83 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 CRISP2P16562 243 aa3.77□□□□□ -1.81
PSEN1-211ENST00000554995 ZNF30P17039 623 aa3.77□□□□□ -1.81
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms