RNA–Protein interactions for RNA: ENST00000554976.5

TDP1-210, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 3,040 nt, Biotype nonsense mediated decay.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-210ENST00000554976 SLC30A2Q9BRI3 323 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ZFP64Q9NPA5 681 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 B3GAT2Q9NPZ5 323 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 G6PC2Q9NQR9 355 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 LRFN1Q9P244 771 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ATPIF1Q9UII2 106 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 ASPMQ8IZT6 3477 aa7.91□□□□□ -1.14
TDP1-210ENST00000554976 LINC00854A0A1B0GVQ3 168 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 CASKO14936 926 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SERPINA3P01011 423 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 CEACAM1P13688 526 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 APEX1P27695 318 aaKnown RBP7.9□□□□□ -1.14
TDP1-210ENST00000554976 ADAM8P78325 824 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 WDR38Q5JTN6 314 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 RAET1LQ5VY80 246 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 STEAP3Q658P3 488 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 IGFL2Q6UWQ7 119 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 LRRTM1Q86UE6 522 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 ZNF248Q8NDW4 579 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 RNF133Q8WVZ7 376 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 NABP1Q96AH0 204 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP7.9□□□□□ -1.14
TDP1-210ENST00000554976 RERGLQ9H628 205 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 PPP1R3EQ9H7J1 279 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SPEF1Q9Y4P9 236 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 LRP12Q9Y561 859 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 LHFPL6Q9Y693 200 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 ZNF879B4DU55 563 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 KHDRBS3O75525 346 aaKnown RBP7.9□□□□□ -1.14
TDP1-210ENST00000554976 B3GALNT1O75752 331 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 TACSTD2P09758 323 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 HIST1H3AP68431 136 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 RTP5Q14D33 572 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 OR1C1Q15619 314 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SLC25A35Q3KQZ1 300 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 HIST2H3PS2Q5TEC6 136 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SLC18B1Q6NT16 456 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SFXN4Q6P4A7 337 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 HIST2H3AQ71DI3 136 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 YRDCQ86U90 279 aaKnown RBP7.9□□□□□ -1.14
TDP1-210ENST00000554976 GLB1L2Q8IW92 636 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 YIPF7Q8N8F6 280 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 OR9K2Q8NGE7 335 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 C11orf40Q8WZ69 217 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 MCHR2Q969V1 340 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 KIAA1143Q96AT1 154 aaPredicted RBP7.9□□□□□ -1.14
TDP1-210ENST00000554976 DCBLD2Q96PD2 775 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 CCDC32Q9BV29 185 aa7.9□□□□□ -1.14
TDP1-210ENST00000554976 SF3B5Q9BWJ5 86 aaKnown RBP7.9□□□□□ -1.14
TDP1-210ENST00000554976 LOC110117498-PIK3R3F6TDL0 507 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 EIF1BO60739 113 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 HLA-DQB1P01920 261 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 LAP3P28838 519 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 LHX2P50458 406 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 RAC3P60763 192 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 GPR85P60893 370 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 PPP3R1P63098 170 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 EIF2B1Q14232 305 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 DNM1P34Q6PK57 102 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 PAMR1Q6UXH9 720 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 LRRN1Q6UXK5 716 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ELMOD2Q8IZ81 293 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 OR10AC1Q8NH08 325 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 AP3S1Q92572 193 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 KCTD12Q96CX2 325 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 FER1L6-AS2Q96M78 137 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ZNF385AQ96PM9 386 aaKnown RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 TTTY12Q9BZ98 90 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 FAM206AQ9NX38 181 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 TBC1D24Q9ULP9 559 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 RHBDD3Q9Y3P4 386 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 IGHV3-15A0A0B4J1V0 119 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ISPDA4D126 451 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 TRABD2BA6NFA1 517 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 IGHG1P01857 330 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 KRT8P05787 483 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 CELA3AP09093 270 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ANOS1P23352 680 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 DCTDP32321 178 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 MAGEB1P43366 347 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 CLDN18P56856 261 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 CSNK2A1P68400 391 aaPredicted RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 CAMK2DQ13557 499 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 WIPI1Q5MNZ9 446 aaPredicted RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 HDDC2Q7Z4H3 204 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 CCDC28AQ8IWP9 274 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 C20orf196Q8IYI0 205 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 GALNT16Q8N428 558 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 OR51A4Q8NGJ6 313 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ACOT12Q8WYK0 555 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 JSRP1Q96MG2 331 aaPredicted RBP7.89□□□□□ -1.15
TDP1-210ENST00000554976 NOX4Q9NPH5 578 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 TMEM212A6NML5 194 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 GJE1A6NN92 205 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 HPGDSO60760 199 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 VAMP5O95183 116 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 F10P00742 488 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ISG15P05161 165 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 ADRA2CP18825 462 aa7.89□□□□□ -1.15
TDP1-210ENST00000554976 PTBP1P26599 531 aaKnown RBP eCLIP7.89□□□□□ -1.155e-6■■□□□ 13.3
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms