RNA–Protein interactions for RNA: ENST00000553989.1

TDP1-208, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 2

Gene TDP1, Length 728 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-208ENST00000553989 PIGFQ07326 219 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PPP1R8Q12972 351 aaKnown RBP7.68□□□□□ -1.18
TDP1-208ENST00000553989 SCARB2Q14108 478 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 MST1LQ2TV78 715 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 CR1LQ2VPA4 569 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 ZNF404Q494X3 552 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 ANKDD1AQ495B1 522 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 C1QTNF12Q5T7M4 302 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PRAMEF8Q5VWM4 474 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PRAMEF7Q5VXH5 474 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 RNLSQ5VYX0 342 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 REEP3Q6NUK4 255 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 VTCN1Q7Z7D3 282 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PEX5LQ8IYB4 626 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 ZNF440Q8IYI8 595 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 C10orf111Q8N326 155 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 STX19Q8N4C7 294 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 OR10G2Q8NGC3 310 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 OR4C15Q8NGM1 316 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 OR1K1Q8NGR3 316 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 MCFD2Q8NI22 146 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 GGHQ92820 318 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 SIGLEC11Q96RL6 698 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 FEVQ99581 238 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 KATNB1Q9BVA0 655 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 SF3B5Q9BWJ5 86 aaKnown RBP7.68□□□□□ -1.18
TDP1-208ENST00000553989 CDCA4Q9BXL8 241 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 HEATR1Q9H583 2144 aaKnown RBP7.68□□□□□ -1.18
TDP1-208ENST00000553989 DYNLRB1Q9NP97 96 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 IMPAD1Q9NX62 359 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 NDUFAF4Q9P032 175 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 DAPK2Q9UIK4 370 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 TMCC3Q9ULS5 477 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 ENPP4Q9Y6X5 453 aa7.68□□□□□ -1.18
TDP1-208ENST00000553989 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP7.67□□□□□ -1.18
TDP1-208ENST00000553989 PRAMEF27A3QJZ7 478 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 TMEM247A6NEH6 219 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 OR6C65A6NJZ3 312 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 C5orf58C9J3I9 102 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 LOC110117498-PIK3R3F6TDL0 507 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 J3QRK9 145 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 FAAHO00519 579 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 MAGEB3O15480 346 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 TCF21O43680 179 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 AIREO43918 545 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 WBP4O75554 376 aaKnown RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 CECR9P0C854 216 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 GKN3PP0CG01 181 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 ARAFP10398 606 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 DAOP14920 347 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 APEX1P27695 318 aaKnown RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 SOX6P35712 828 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 MAP2K4P45985 399 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 CAPZA2P47755 286 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 SELENOPP49908 381 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 PPOXP50336 477 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 IDH3GP51553 393 aaPredicted RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 NAAAQ02083 359 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 PRKCDQ05655 676 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 LGALS3BPQ08380 585 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 COX10Q12887 443 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 ADIPOQQ15848 244 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 MEDAGQ5VYS4 303 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 ZNF367Q7RTV3 350 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 ENTHD1Q8IYW4 607 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 SGCDQ92629 289 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 SPATA5L1Q9BVQ7 753 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 NXF2Q9GZY0 626 aaKnown RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 DCSTAMPQ9H295 470 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 SLC38A1Q9H2H9 487 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 MTHFD2LQ9H903 347 aaPredicted RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 MOV10Q9HCE1 1003 aaKnown RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 RLIMQ9NVW2 624 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 SELENONQ9NZV5 590 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 CRNNQ9UBG3 495 aaPredicted RBP7.67□□□□□ -1.18
TDP1-208ENST00000553989 P2RX2Q9UBL9 471 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 CORINQ9Y5Q5 1042 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 LYVE1Q9Y5Y7 322 aa7.67□□□□□ -1.18
TDP1-208ENST00000553989 MALRD1Q5VYJ5 2156 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 IRGMA1A4Y4 181 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 A8MVM7 634 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 FRS3O43559 492 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 UPK3AO75631 287 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 SERPINB7O75635 380 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 VAMP5O95183 116 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 AHSA1O95433 338 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 C1QCP02747 245 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 IFNW1P05000 195 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 BCHEP06276 602 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 PIPP12273 146 aaPredicted RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 MVDP53602 400 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 CRISP1P54107 249 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 DEFA1P59665 94 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 DEFA3P59666 94 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 SNRPGP62308 76 aaKnown RBP7.66□□□□□ -1.18
TDP1-208ENST00000553989 CBX3Q13185 183 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 IRF3Q14653 427 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 EFNB3Q15768 340 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 TIGD6Q17RP2 521 aa7.66□□□□□ -1.18
TDP1-208ENST00000553989 C1orf140Q5VVS0 124 aa7.66□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms