RNA–Protein interactions for RNA: ENST00000553950.5

SHMT2-210, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 2

Gene SHMT2, Length 584 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-210ENST00000553950 OPN3Q9H1Y3 402 aaPredicted RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 OR10A4Q9H209 315 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 C1orf198Q9H425 327 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 MRPL22Q9NWU5 206 aaKnown RBP12.75□□□□□ -0.37
SHMT2-210ENST00000553950 ERGIC3Q9Y282 383 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 PCDHGB5Q9Y5G0 923 aa12.75□□□□□ -0.37
SHMT2-210ENST00000553950 DAPL1A0PJW8 107 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 TVP23AA6NH52 213 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 A8MXE2 369 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 C1QL1O75973 258 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 TFP02787 698 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 LYNP07948 512 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 PSMB1P20618 241 aaKnown RBP12.74□□□□□ -0.37
SHMT2-210ENST00000553950 IGHV1-2P23083 117 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 EDNRAP25101 427 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CDAP32320 146 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 UBE2NP61088 152 aaKnown RBP12.74□□□□□ -0.37
SHMT2-210ENST00000553950 ARF1P84077 181 aaKnown RBP12.74□□□□□ -0.37
SHMT2-210ENST00000553950 EGR3Q06889 387 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 TBCEQ15813 527 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-210ENST00000553950 TMPRSS11AQ6ZMR5 421 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 SLC16A14Q7RTX9 510 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 P2RY8Q86VZ1 359 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CDC20BQ86Y33 519 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF610Q8N9Z0 462 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 GJC3Q8NFK1 279 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 STEAP2Q8NFT2 490 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 TSPAN14Q8NG11 270 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 OR4F15Q8NGB8 312 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CCDC120Q96HB5 630 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 MND1Q9BWT6 205 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CDCA4Q9BXL8 241 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CCDC90BQ9GZT6 254 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 JKAMPQ9P055 326 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 CYB5R1Q9UHQ9 305 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 ATPIF1Q9UII2 106 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 ERRFI1Q9UJM3 462 aaPredicted RBP12.74□□□□□ -0.37
SHMT2-210ENST00000553950 SLC5A6Q9Y289 635 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 AMDHD2Q9Y303 409 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 NBASA2RRP1 2371 aa12.74□□□□□ -0.37
SHMT2-210ENST00000553950 HIVEP3Q5T1R4 2406 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 NBEAQ8NFP9 2946 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ARPC4-TTLL3A0A0A6YYG9 625 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 TMEM129A0AVI4 362 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF878C9JN71 531 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 J3QRE1 110 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF593O00488 134 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 LRRTM2O43300 516 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 PRB1P04280 392 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 TUBA4AP68366 448 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 MRPL28Q13084 256 aaKnown RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 EIF2B1Q14232 305 aaKnown RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 FBXL19-AS1Q494R0 122 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 SFRP5Q5T4F7 317 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 TMEM53Q6P2H8 277 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 BHLHA15Q7RTS1 189 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 DPY19L4Q7Z388 723 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZSCAN2Q7Z7L9 614 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 LUZP2Q86TE4 346 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 KLHL36Q8N4N3 616 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF433Q8N7K0 673 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 RELL2Q8NC24 303 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 OR52N1Q8NH53 320 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 OR52N5Q8NH56 324 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZNRF4Q8WWF5 429 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 SIGLEC11Q96RL6 698 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF416Q9BWM5 594 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 MRPS26Q9BYN8 205 aaKnown RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 HDHD2Q9H0R4 259 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 PAK1IP1Q9NWT1 392 aaPredicted RBP12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ASH2LQ9UBL3 628 aa12.73□□□□□ -0.37
SHMT2-210ENST00000553950 ZFYVE26Q68DK2 2539 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 DIDO1Q9BTC0 2240 aaKnown RBP12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF254O75437 659 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 RAD51DO75771 328 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 WNT11O96014 354 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 PTHP01270 115 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 KRT8P05787 483 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 PPP3CBP16298 524 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ARR3P36575 388 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 CD79BP40259 229 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 UQCRFS1P47985 274 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ADORA2A-AS1P86434 159 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ENDOGQ14249 297 aaKnown RBP12.72□□□□□ -0.37
SHMT2-210ENST00000553950 GALEQ14376 348 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 RAB35Q15286 201 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 MEP1BQ16820 701 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 TBRG1Q3YBR2 411 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 C9orf135Q5VTT2 229 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF544Q6NX49 715 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 XKRXQ6PP77 449 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 DEGS2Q6QHC5 323 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 LYPD4Q6UWN0 246 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 B3GLCTQ6Y288 498 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 PLEKHG7Q6ZR37 379 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 KCTD20Q7Z5Y7 419 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 CXorf67Q86X51 503 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-210ENST00000553950 SYS1Q8N2H4 156 aa12.72□□□□□ -0.37
SHMT2-210ENST00000553950 ZNF808Q8N4W9 903 aaPredicted RBP12.72□□□□□ -0.37
SHMT2-210ENST00000553950 CA5BP1Q8WTZ4 195 aa12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 39.3 ms