RNA–Protein interactions for RNA: ENST00000553923.1

SRP54-204, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-204ENST00000553923 SENP1Q9P0U3 644 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ARMCX1Q9P291 453 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 CLEC2DQ9UHP7 191 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 LGALS13Q9UHV8 139 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 UBQLN1Q9UMX0 589 aaKnown RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 SCML1Q9UN30 329 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 TSSC4Q9Y5U2 329 aaPredicted RBP1.76□□□□□ -2.13
SRP54-204ENST00000553923 V9GY05 133 aa1.76□□□□□ -2.13
SRP54-204ENST00000553923 ATRXP46100 2492 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 GAKO14976 1311 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ADGRA3Q8IWK6 1321 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CDHR2Q9BYE9 1310 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 MUC19Q7Z5P9 8384 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IGHV3OR16-12A0A075B7B8 117 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IGHV4-30-2A0A087WSY4 118 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KIR2DL5BA0A0G2JN68 375 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KIR2DL5BA0A0G2JPC4 375 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 A0A1B0GVI7 797 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 BCLAF3A2AJT9 711 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 A6NIZ1 184 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RPL37AP8A6NKH3 93 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 DHRS7CA6NNS2 312 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 FOXI3A8MTJ6 420 aaPredicted RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 A8MXK9 166 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 HACD1B0YJ81 288 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SEC14L6B5MCN3 397 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 E9PAM4 449 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 PRAMEF26H0Y7S4 382 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 H3BN98 237 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 K7EN84 100 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SAP18O00422 153 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 ZW10O43264 779 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 COCHO43405 550 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CLDN11O75508 207 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RCBTB2O95199 551 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 VAPBO95292 243 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 PTTG1O95997 202 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 LALBAP00709 142 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RENP00797 406 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IGHV2-5P01817 119 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IGHG1P01857 330 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CATP04040 527 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 ARG1P05089 322 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 FGF1P05230 155 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 H2AFZP0C0S5 128 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SLC35E2P0CK97 266 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 GIMD1P0DJR0 217 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 BGNP21810 368 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IL32P24001 234 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CXCR2P25025 360 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IVDP26440 423 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KDELR2P33947 212 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 PTGDSP41222 190 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CSNK1DP48730 415 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 GSK3BP49841 420 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CCR8P51685 355 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 HNRNPA3P51991 378 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 PLK1P53350 603 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CLDN6P56747 220 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RAP1BP61224 184 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SELENOTP62341 195 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 VSNL1P62760 191 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RPL32P62910 135 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 CTAG1AP78358 180 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SLC35B1P78383 322 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SP4Q02446 784 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 IFFO1Q0D2I5 559 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CYLC2Q14093 348 aaPredicted RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 DGCR6Q14129 220 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 C15orf32Q32M92 178 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 C5orf47Q569G3 176 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CDKL4Q5MAI5 379 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 UTF1Q5T230 341 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 PLEKHG7Q6ZR37 379 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 MRPL55Q7Z7F7 128 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 LRRC6Q86X45 466 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ZFAND4Q86XD8 727 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KIR2DL5AQ8N109 375 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SVOPLQ8N434 492 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 RNF10Q8N5U6 811 aaKnown RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 ZFP41Q8N8Y5 198 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ZNF557Q8N988 423 aaPredicted RBP1.75□□□□□ -2.13
SRP54-204ENST00000553923 WDR31Q8NA23 367 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 HSD17B11Q8NBQ5 300 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 DUSP18Q8NEJ0 188 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 OR6K6Q8NGW6 343 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 KIR2DL5BQ8NHK3 375 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CDC26Q8NHZ8 85 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 CCDC26Q8TAB7 109 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ITFG1Q8TB96 612 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 OR51E1Q8TCB6 317 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 LGALS14Q8TCE9 139 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SDR42E1Q8WUS8 393 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 DNAJB3Q8WWF6 145 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ING5Q8WYH8 240 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 OR8D1Q8WZ84 308 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 C11orf52Q96A22 123 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 SLC25A38Q96DW6 304 aa1.75□□□□□ -2.13
SRP54-204ENST00000553923 ZNF75AQ96N20 296 aa1.75□□□□□ -2.13
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms