RNA–Protein interactions for RNA: ENST00000553544.1

SRP54-203, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 491 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-203ENST00000553544 MIDNQ504T8 468 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 MTX3Q5HYI7 312 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC25A47Q6Q0C1 308 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 TBPL2Q6SJ96 375 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 RBMS3Q6XE24 437 aaKnown RBP10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC16A14Q7RTX9 510 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 TRPM8Q7Z2W7 1104 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 C1QL2Q7Z5L3 287 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 DEFB107AQ8IZN7 70 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 FITM2Q8N6M3 262 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 OR4M2Q8NGB6 313 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 OR51A7Q8NH64 312 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 ZNF519Q8TB69 540 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC7A13Q8TCU3 470 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 NABP1Q96AH0 204 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 SLC6A7Q99884 636 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 ALG12Q9BV10 488 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 C1orf21Q9H246 121 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 GORASP2Q9H8Y8 452 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 NMNAT1Q9HAN9 279 aaPredicted RBP10.08□□□□□ -0.8
SRP54-203ENST00000553544 SIAEQ9HAT2 523 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 ESM1Q9NQ30 184 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 NDUFAF4Q9P032 175 aa10.08□□□□□ -0.8
SRP54-203ENST00000553544 PRPF19Q9UMS4 504 aaKnown RBP10.08□□□□□ -0.8
SRP54-203ENST00000553544 TRAV27A0A087WT01 109 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 EFCAB9A8MZ26 197 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 J3QLI3 93 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 PLPP2O43688 288 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 MPZL1O95297 269 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 SNAP29O95721 258 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 ZNF26P17031 533 aaPredicted RBP10.07□□□□□ -0.8
SRP54-203ENST00000553544 RHCEP18577 417 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 ALDH3B1P43353 468 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 RASSF2P50749 326 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 UBA52P62987 128 aaKnown RBP10.07□□□□□ -0.8
SRP54-203ENST00000553544 FMODQ06828 376 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 DNAL1Q4LDG9 190 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 THEM4Q5T1C6 240 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 TMEM53Q6P2H8 277 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 ZNF730Q6ZMV8 503 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 FOXL2NBQ6ZUU3 175 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 OAFQ86UD1 273 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 IGFN1Q86VF2 1251 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 PAQR4Q8N4S7 273 aaPredicted RBP10.07□□□□□ -0.8
SRP54-203ENST00000553544 RNF148Q8N7C7 305 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 FAM86B1Q8N7N1 296 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 SLC30A7Q8NEW0 376 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 FNDC8Q8TC99 324 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 YIPF5Q969M3 257 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 MCUR1Q96AQ8 359 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 NSMCE2Q96MF7 247 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 TSPAN32Q96QS1 320 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 SYT3Q9BQG1 590 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 TMPRSS13Q9BYE2 586 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 C1orf198Q9H425 327 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 KRCC1Q9NPI7 259 aaPredicted RBP10.07□□□□□ -0.8
SRP54-203ENST00000553544 ARL8BQ9NVJ2 186 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 CD300AQ9UGN4 299 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 SLC7A8Q9UHI5 535 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 FAM32AQ9Y421 112 aaKnown RBP10.07□□□□□ -0.8
SRP54-203ENST00000553544 VWFP04275 2813 aa10.07□□□□□ -0.8
SRP54-203ENST00000553544 B2RBV5 119 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 PTP4A3O75365 173 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 PTHP01270 115 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 SEMG1P04279 462 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 H1F0P07305 194 aaKnown RBP10.06□□□□□ -0.8
SRP54-203ENST00000553544 NR2C1P13056 603 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 HOXB6P17509 224 aaKnown RBP10.06□□□□□ -0.8
SRP54-203ENST00000553544 GATA3P23771 443 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 CDAP32320 146 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 RPS23P62266 143 aaKnown RBP10.06□□□□□ -0.8
SRP54-203ENST00000553544 GALK2Q01415 458 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 CD47Q08722 323 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 TOP3AQ13472 1001 aaPredicted RBP10.06□□□□□ -0.8
SRP54-203ENST00000553544 ZBED5Q49AG3 693 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 FAM27BQ5VT28 67 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 DCAF12L2Q5VW00 463 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 FAM205BPQ63HN1 556 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 FAM122BQ7Z309 247 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 LRP11Q86VZ4 500 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 CLDN22Q8N7P3 220 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 CPEB3Q8NE35 698 aaKnown RBP10.06□□□□□ -0.8
SRP54-203ENST00000553544 OR13C2Q8NGS9 318 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 RAB39BQ96DA2 213 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 DHRS1Q96LJ7 313 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 RBP7Q96R05 134 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 CDRT15Q96T59 188 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 FUZQ9BT04 418 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 TRIM15Q9C019 465 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 NDEL1Q9GZM8 345 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 C7orf69Q9H7B7 122 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 ZNF665Q9H7R5 613 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 RNF121Q9H920 327 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 DUSP13Q9UII6 198 aa10.06□□□□□ -0.8
SRP54-203ENST00000553544 TANC2Q9HCD6 1990 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 SLC22A23A1A5C7 686 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 A6NIZ1 184 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 POM121CA8CG34 1229 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 ATP5HO75947 161 aa10.05□□□□□ -0.8
SRP54-203ENST00000553544 CD14P08571 375 aa10.05□□□□□ -0.8
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms