RNA–Protein interactions for RNA: ENST00000553491.5

ATXN3-220, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 857 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-220ENST00000553491 UMPSP11172 480 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 NQO1P15559 274 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 KLK2P20151 261 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TNFRSF1BP20333 461 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 AHCYP23526 432 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 IFNA8P32881 189 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PCGF2P35227 344 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ACAA2P42765 397 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 OR1E2P47887 323 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 RASSF2P50749 326 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SLC7A2P52569 658 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 F2RL1P55085 397 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 DLX5P56178 289 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TAS2R41P59536 307 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TLE4Q04727 773 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 RBBP4Q09028 425 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 C1DQ13901 141 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TSC22D1Q15714 1073 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 DUSP7Q16829 419 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM44Q2T9K0 475 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CTU2Q2VPK5 515 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CYBRD1Q53TN4 286 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SYT14P1Q58G82 188 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 OTUD3Q5T2D3 398 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 EEF1A1P5Q5VTE0 462 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 C9orf135Q5VTT2 229 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PRAMEF8Q5VWM4 474 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PRAMEF7Q5VXH5 474 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 GLYATQ6IB77 296 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 C3orf33Q6P1S2 294 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ERICH5Q6P6B1 374 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TTC33Q6PID6 262 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TMPPEQ6ZT21 453 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 HIST3H2AQ7L7L0 130 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 NUFIP2Q7Z417 695 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PIGWQ7Z7B1 504 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CARM1Q86X55 608 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PTOV1Q86YD1 416 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 RBM45Q8IUH3 476 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 MICU2Q8IYU8 434 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 KDM8Q8N371 416 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM99Q8N816 258 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 RELL2Q8NC24 303 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ABHD3Q8WU67 409 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 LZICQ8WZA0 190 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 HIST1H2ACQ93077 130 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 RNASE6Q93091 150 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CPNE4Q96A23 557 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 STARD4Q96DR4 205 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SLC47A1Q96FL8 570 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ARL5BQ96KC2 179 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF583Q96ND8 569 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ZFP3Q96NJ6 502 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF300Q96RE9 604 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CDRT15Q96T59 188 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 HOPXQ9BPY8 73 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 NUDT16L1Q9BRJ7 211 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CENPOQ9BU64 300 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 MED18Q9BUE0 208 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 SFXN3Q9BWM7 321 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 PIGMQ9H3S5 423 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 TMEM38AQ9H6F2 299 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 KAT8Q9H7Z6 458 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 FANCFQ9NPI8 374 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 EXOSC3Q9NQT5 275 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CYSLTR2Q9NS75 346 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CMTM6Q9NX76 183 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 CLCF1Q9UBD9 225 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 NOSIPQ9Y314 301 aaKnown RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 ZNF175Q9Y473 711 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 V9GYQ6 96 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 USP9YO00507 2555 aaPredicted RBP4.12□□□□□ -1.75
ATXN3-220ENST00000553491 BSNQ9UPA5 3926 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 LRRK2Q5S007 2527 aa4.12□□□□□ -1.75
ATXN3-220ENST00000553491 HECTD1Q9ULT8 2610 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 AKAP6Q13023 2319 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SMG1Q96Q15 3661 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 A0A1B0GWA3 101 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 A8MXE2 369 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 A8MZ25 164 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 C11orf98E9PRG8 122 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 C16orf97H3BN30 126 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 MRPL33O75394 65 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 STAMBPO95630 424 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 LGI1O95970 557 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CH25HO95992 272 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 SERPINA1P01009 418 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CRHP06850 196 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 PNMTP11086 282 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 RPS4Y1P22090 263 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 IL32P24001 234 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 FKBP2P26885 142 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ELK4P28324 431 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 KDELR2P33947 212 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CD79BP40259 229 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 PSMB10P40306 273 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 CLK1P49759 484 aaKnown RBP4.11□□□□□ -1.75
ATXN3-220ENST00000553491 MNAT1P51948 309 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 P2RX3P56373 397 aa4.11□□□□□ -1.75
ATXN3-220ENST00000553491 ITGADQ13349 1161 aa4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms