RNA–Protein interactions for RNA: ENST00000553426.1

LINC00643-202, long intergenic non-protein coding RNA 643, humanhuman

TSL 3 BASIC

Gene LINC00643, Length 526 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00643-202ENST00000553426 IGFN1Q86VF2 1251 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 TREML1Q86YW5 311 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 ZNF101Q8IZC7 436 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 POU5F2Q8N7G0 328 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 SLC25A40Q8TBP6 338 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 ACOT11Q8WXI4 607 aaPredicted RBP10.87□□□□□ -0.67
LINC00643-202ENST00000553426 DIRC2Q96SL1 478 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 WACQ9BTA9 647 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 OR2J1Q9GZK6 312 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 ZNF665Q9H7R5 613 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 EFCAB1Q9HAE3 211 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 CMTM6Q9NX76 183 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 ARMCX1Q9P291 453 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 RHCGQ9UBD6 479 aa10.87□□□□□ -0.67
LINC00643-202ENST00000553426 LOC100509620A0A075B734 347 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 IGKV1D-43A0A0B4J1Z2 117 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 A0A0G2JMP0 313 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 A0A0X1KG70 313 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 WNT9BO14905 357 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 SPRY3O43610 288 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 AHCYL1O43865 530 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 COX4I1P13073 169 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 ITGA2P17301 1181 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 MAKP20794 623 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 WNT5AP41221 380 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 LMO4P61968 165 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 GUCY1A3Q02108 690 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 CGB2Q6NT52 195 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 MBOAT2Q6ZWT7 520 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 SLC15A3Q8IY34 581 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 OR4M2Q8NGB6 313 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 KLF14Q8TD94 323 aaPredicted RBP10.86□□□□□ -0.67
LINC00643-202ENST00000553426 ZNF418Q8TF45 676 aaPredicted RBP10.86□□□□□ -0.67
LINC00643-202ENST00000553426 IPCEF1Q8WWN9 437 aaPredicted RBP10.86□□□□□ -0.67
LINC00643-202ENST00000553426 CCL17Q92583 94 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 FAM162AQ96A26 154 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 MARS2Q96GW9 593 aaKnown RBP10.86□□□□□ -0.67
LINC00643-202ENST00000553426 C4orf45Q96LM5 186 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 ZDHHC8Q9ULC8 765 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 TMEM5Q9Y2B1 443 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 FAM32AQ9Y421 112 aaKnown RBP10.86□□□□□ -0.67
LINC00643-202ENST00000553426 WIPI2Q9Y4P8 454 aa10.86□□□□□ -0.67
LINC00643-202ENST00000553426 J3KTA2 159 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 GMNNO75496 209 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 MPZL1O95297 269 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 ABHD16AO95870 558 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 CD14P08571 375 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 GSTM3P21266 225 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 TUBG1P23258 451 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 SLC7A2P52569 658 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 SCRN3Q0VDG4 424 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 ZBED5Q49AG3 693 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 ZNF774Q6NX45 483 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 FOXL2NBQ6ZUU3 175 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 CBLL1Q75N03 491 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 CLDN22Q8N7P3 220 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 LRRC75AQ8NAA5 344 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 OR13C2Q8NGS9 318 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 HSH2DQ96JZ2 352 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 ZNF570Q96NI8 536 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 GAL3ST1Q99999 423 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 WNT5BQ9H1J7 359 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 ANKRD19PQ9H560 264 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 CCDC134Q9H6E4 229 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 KRCC1Q9NPI7 259 aaPredicted RBP10.85□□□□□ -0.67
LINC00643-202ENST00000553426 POLE4Q9NR33 117 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 TUBG2Q9NRH3 451 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 MAN2C1Q9NTJ4 1040 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 RPS6KA6Q9UK32 745 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 SNX13Q9Y5W8 968 aa10.85□□□□□ -0.67
LINC00643-202ENST00000553426 A0A087WUU8 490 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 ISPDA4D126 451 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 TIMM8AO60220 97 aaPredicted RBP10.84□□□□□ -0.67
LINC00643-202ENST00000553426 ICMTO60725 284 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 SERPINA1P01009 418 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 IGHV1-46P01743 117 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 ADH4P08319 380 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 COX5BP10606 129 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 TNFSF4P23510 183 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 MPV17P39210 176 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 GPR4P46093 362 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 MMP15P51511 669 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 MTX3Q5HYI7 312 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 THSD4Q6ZMP0 1018 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 RFPL4BQ6ZWI9 263 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 TMPRSS11FQ6ZWK6 438 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 MEX3DQ86XN8 651 aaKnown RBP10.84□□□□□ -0.67
LINC00643-202ENST00000553426 FAM156AQ8NDB6 213 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 NPEPL1Q8NDH3 523 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 ST7LQ8TDW4 575 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 ZFAND2BQ8WV99 257 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 GTF3AQ92664 365 aaKnown RBP10.84□□□□□ -0.67
LINC00643-202ENST00000553426 COG8Q96MW5 612 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 JMJD8Q96S16 334 aa10.84□□□□□ -0.67
LINC00643-202ENST00000553426 KCTD14Q9BQ13 255 aaPredicted RBP10.84□□□□□ -0.67
LINC00643-202ENST00000553426 NMNAT1Q9HAN9 279 aaPredicted RBP10.84□□□□□ -0.67
LINC00643-202ENST00000553426 PRSS37A4D1T9 235 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 H7C1C5 153 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 J3QLI3 93 aa10.83□□□□□ -0.68
LINC00643-202ENST00000553426 NME4O00746 187 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms