RNA–Protein interactions for RNA: ENST00000553340.1

SYNE3-202, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

TSL 1 (best) BASIC

Gene SYNE3, Length 2,615 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-202ENST00000553340 B9D1Q9UPM9 204 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 DISC1C4P0D8 188 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 CCSO14618 274 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 SPARCP09486 303 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 ZNF28P17035 718 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 PMPCAQ10713 525 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 ATXN7L3Q14CW9 347 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-202ENST00000553340 ARMC6Q6NXE6 501 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 KCTD18Q6PI47 426 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-202ENST00000553340 FOXN4Q96NZ1 517 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 SLC6A7Q99884 636 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 GAREM1Q9H706 876 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 ZMAT3Q9HA38 289 aaKnown RBP15.81■□□□□ 0.12
SYNE3-202ENST00000553340 FBRSQ9HAH7 460 aa15.81■□□□□ 0.12
SYNE3-202ENST00000553340 PRMT8Q9NR22 394 aaPredicted RBP15.81■□□□□ 0.12
SYNE3-202ENST00000553340 MRPS18BQ9Y676 258 aaKnown RBP15.81■□□□□ 0.12
SYNE3-202ENST00000553340 A0A1W2PQF6 199 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 PCP4L1A6NKN8 68 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 C11orf98E9PRG8 122 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 DOK2O60496 412 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ATG12O94817 140 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 MEF2DQ14814 521 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ZNF584Q8IVC4 421 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 SLC37A2Q8TED4 501 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 OIT3Q8WWZ8 545 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 METTL21AQ8WXB1 218 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ZNF524Q96C55 264 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 SLC25A44Q96H78 314 aaPredicted RBP15.8■□□□□ 0.12
SYNE3-202ENST00000553340 CMKLR1Q99788 373 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 CGGBP1Q9UFW8 167 aaPredicted RBP15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ALPK2Q86TB3 2170 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 CSN2P05814 226 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 FSTP19883 344 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 CAPZA1P52907 286 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ATP1B3P54709 279 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ROM1Q03395 351 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 ELOCQ15369 112 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 PRAMEF17Q5VTA0 474 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 PAPD4Q6PIY7 484 aaKnown RBP15.8■□□□□ 0.12
SYNE3-202ENST00000553340 PRRT1Q99946 306 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 SAV1Q9H4B6 383 aaPredicted RBP15.8■□□□□ 0.12
SYNE3-202ENST00000553340 SLC39A1Q9NY26 324 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 PLEKHA6Q9Y2H5 1048 aa15.8■□□□□ 0.12
SYNE3-202ENST00000553340 DCDC2BA2VCK2 349 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 MEGF11A6BM72 1044 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 HLA-GP17693 338 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 IGFBP3P17936 291 aaPredicted RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 RIDAP52758 137 aaKnown RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 ADAM8P78325 824 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 MFGE8Q08431 387 aaPredicted RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 BIKQ13323 160 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 PRTGQ2VWP7 1150 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 TMEM240Q5SV17 173 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 LYG2Q86SG7 212 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 ZSCAN1Q8NBB4 408 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 AVL9Q8NBF6 648 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 THAP6Q8TBB0 222 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 ADAMTS18Q8TE60 1221 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 TSNAXQ99598 290 aaKnown RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 KLK13Q9UKR3 277 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 PCDHB10Q9UN67 800 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 RAB19A4D1S5 217 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 F5H0A9 414 aaPredicted RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 H7C2Y5 167 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 UTS2O95399 124 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 IL33O95760 270 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 LIPCP11150 499 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 CASRP41180 1078 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 PRKXP51817 358 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 NKPD1Q17RQ9 610 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 C3orf33Q6P1S2 294 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 SLC25A42Q86VD7 318 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 INO80EQ8NBZ0 244 aaPredicted RBP15.79■□□□□ 0.12
SYNE3-202ENST00000553340 ADAM19Q9H013 955 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 VSIG4Q9Y279 399 aa15.79■□□□□ 0.12
SYNE3-202ENST00000553340 KIR2DS5A0A0G2JLQ3 304 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 A0A0G2JNG1 304 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 PRSS37A4D1T9 235 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 KIR2DS3K7RE56 304 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 SLC16A7O60669 478 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 SLC25A12O75746 678 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 MYOGP15173 224 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 ZBTB25P24278 435 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CXCR1P25024 350 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CXADRP78310 365 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 KIR2DS5Q14953 304 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 RNASE10Q5GAN6 216 aaKnown RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CD163Q86VB7 1156 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 PARGQ86W56 976 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 CATSPERDQ86XM0 798 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 JAGN1Q8N5M9 183 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 C19orf47Q8N9M1 422 aaKnown RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 BOLLQ8N9W6 283 aaKnown RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 DNAJA3Q96EY1 480 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 FAM117AQ9C073 453 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 SLC2A8Q9NY64 477 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 MYEF2Q9P2K5 600 aaKnown RBP15.78■□□□□ 0.12
SYNE3-202ENST00000553340 NDRG3Q9UGV2 375 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 KCNK7Q9Y2U2 307 aa15.78■□□□□ 0.12
SYNE3-202ENST00000553340 TMEM235A6NFC5 223 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms