RNA–Protein interactions for RNA: ENST00000553300.5

HNRNPC-205, Transcript of heterogeneous nuclear ribonucleoprotein C (C1/C2), humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene HNRNPC, Length 1,375 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HNRNPC-205ENST00000553300 LINC00471Q8N535 108 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 CCDC197Q8NCU1 140 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 HPS1Q92902 700 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 POM121L2Q96KW2 1035 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 BPESC1Q9GZL8 116 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 POLE4Q9NR33 117 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TUBG2Q9NRH3 451 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 VSX1Q9NZR4 365 aaPredicted RBP11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TAAR3PQ9P1P4 343 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 NDRG4Q9ULP0 352 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 V9GYQ6 96 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP11.28□□□□□ -0.61e-8■■■■■ 51.1
HNRNPC-205ENST00000553300 C5orf49A4QMS7 147 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 H3BSA7 217 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 H7C1C5 153 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 OR10H3O60404 316 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 KHDRBS3O75525 346 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 IGHV3-13P01766 116 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TACSTD2P09758 323 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ACHEP22303 614 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 FPR3P25089 353 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 CRABP1P29762 137 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 GCH1P30793 250 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ALDH3B1P43353 468 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 CHN2P52757 468 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 HMGA2P52926 109 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TMEM33P57088 247 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 LSM6P62312 80 aaKnown RBP11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 LCN6P62502 163 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 RIN1Q13671 783 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 RFX4Q33E94 735 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TMEM154Q6P9G4 183 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ZER1Q7Z7L7 766 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ZDHHC21Q8IVQ6 265 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 GLB1L2Q8IW92 636 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 OR1J1Q8NGS3 322 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 AKR7LQ8NHP1 331 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 RDH5Q92781 318 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ZNF416Q9BWM5 594 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 WNT5BQ9H1J7 359 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 TPK1Q9H3S4 243 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 CHODLQ9H9P2 273 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 ELOVL3Q9HB03 270 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 NKIRAS2Q9NYR9 191 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 CDC42EP3Q9UKI2 254 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 FZR1Q9UM11 496 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 IER3IP1Q9Y5U9 82 aa11.28□□□□□ -0.6
HNRNPC-205ENST00000553300 LOC100509620A0A075B734 347 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 C17orf100A8MU93 164 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 ARPC3O15145 178 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 IDH3BO43837 385 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 SLC16A7O60669 478 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 IGHV4-31P0DP07 118 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 CTLA4P16410 223 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 RRM2P31350 389 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 SLC6A6P31641 620 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 LIPAP38571 399 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 ARHGDIAP52565 204 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 AQP6Q13520 282 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 ENDOGQ14249 297 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 CHRFAM7AQ494W8 412 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 FAM209AQ5JX71 171 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 FAM166AQ6J272 317 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 C1orf94Q6P1W5 598 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 PGM2L1Q6PCE3 622 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 DNM1P34Q6PK57 102 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 THSD4Q6ZMP0 1018 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 RASD2Q96D21 266 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 SNX18Q96RF0 628 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 C1orf21Q9H246 121 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 SYT4Q9H2B2 425 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 OR51B6Q9H340 312 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 MAGIXQ9H6Y5 334 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 HINT3Q9NQE9 182 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 MYEF2Q9P2K5 600 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 LPAR3Q9UBY5 353 aa11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 CGGBP1Q9UFW8 167 aaPredicted RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 PRPF19Q9UMS4 504 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 ANK3Q12955 4377 aaKnown RBP11.27□□□□□ -0.61
HNRNPC-205ENST00000553300 ATRQ13535 2644 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 MALRD1Q5VYJ5 2156 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 IGHV4-61A0A0C4DH41 118 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 SOCS2O14508 198 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 CLPTM1O96005 669 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 IFNA2P01563 188 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 NAT2P11245 290 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 WNT5AP41221 380 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 FXYD6P3P58550 94 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 TEKQ02763 1124 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 TSPAN31Q12999 210 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 TRIM25Q14258 630 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 MAD2L1BPQ15013 274 aaPredicted RBP11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 ELFN2Q5R3F8 820 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 MBNL2Q5VZF2 373 aaKnown RBP11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 RPL13AP3Q6NVV1 102 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 ZNF774Q6NX45 483 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 CYP2R1Q6VVX0 501 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 DHFR2Q86XF0 187 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 ZNF101Q8IZC7 436 aa11.26□□□□□ -0.61
HNRNPC-205ENST00000553300 ICA1LQ8NDH6 482 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms