RNA–Protein interactions for RNA: ENST00000553278.1

SCFD1-208, Transcript of sec1 family domain containing 1, humanhuman

TSL 2

Gene SCFD1, Length 795 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-208ENST00000553278 THOC6Q86W42 341 aaKnown RBP4.33□□□□□ -1.72
SCFD1-208ENST00000553278 KLHL30-AS1Q8NEE0 82 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 OR2L2Q8NH16 312 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 CLHC1Q8NHS4 586 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 PDCD6IPQ8WUM4 868 aaKnown RBP4.33□□□□□ -1.72
SCFD1-208ENST00000553278 TFGQ92734 400 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-208ENST00000553278 C1orf147Q96MC9 270 aaPredicted RBP4.33□□□□□ -1.72
SCFD1-208ENST00000553278 ACBD6Q9BR61 282 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 OR52A5Q9H2C5 316 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 RPF2Q9H7B2 306 aaKnown RBP4.33□□□□□ -1.72
SCFD1-208ENST00000553278 ANKHQ9HCJ1 492 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 CLCF1Q9UBD9 225 aa4.33□□□□□ -1.72
SCFD1-208ENST00000553278 A0A1B0GVI7 797 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 PSMB11A5LHX3 300 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 SRP72O76094 671 aaKnown RBP4.32□□□□□ -1.72
SCFD1-208ENST00000553278 PLEKHA8P1O95397 391 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 CSF3P09919 207 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 CAPN2P17655 700 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 PSMB1P20618 241 aaKnown RBP4.32□□□□□ -1.72
SCFD1-208ENST00000553278 BGNP21810 368 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 HTR2CP28335 458 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 BTCP35070 178 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 DIO3P55073 304 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 UCNP55089 124 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 KIAA0087Q14695 138 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 ATAD3CQ5T2N8 411 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 UBE2UQ5VVX9 321 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 TMEM179BQ7Z7N9 219 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 UNC93AQ86WB7 457 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 SNX31Q8N9S9 440 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 NOXO1Q8NFA2 376 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 OR4F15Q8NGB8 312 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 OR4D6Q8NGJ1 314 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 OR6N2Q8NGY6 317 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 RHOXF1Q8NHV9 184 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 ANGPTL6Q8NI99 470 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 BAALCQ8WXS3 180 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 TRNT1Q96Q11 434 aaKnown RBP4.32□□□□□ -1.72
SCFD1-208ENST00000553278 MICU1Q9BPX6 476 aa4.32□□□□□ -1.72
SCFD1-208ENST00000553278 HCFC1P51610 2035 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 GFAPP14136 432 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 CSNK2A2P19784 350 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-208ENST00000553278 RAB4AP20338 218 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 MEOX2P50222 304 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 MXD1Q05195 221 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 UNC119Q13432 240 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 FZD2Q14332 565 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 SLC1A5Q15758 541 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 PSG3Q16557 428 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 ATP6V1FQ16864 119 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 ZBED5Q49AG3 693 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 LCN12Q6JVE5 192 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 RWDD4Q6NW29 188 aaKnown RBP4.31□□□□□ -1.72
SCFD1-208ENST00000553278 MBOAT2Q6ZWT7 520 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 HORMAD1Q86X24 394 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 SYS1Q8N2H4 156 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 ZNF525Q8N782 197 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 DUSP18Q8NEJ0 188 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 OR6K6Q8NGW6 343 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 GEMIN6Q8WXD5 167 aaKnown RBP4.31□□□□□ -1.72
SCFD1-208ENST00000553278 UCN3Q969E3 161 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 GPR21Q99679 349 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 DEFB127Q9H1M4 99 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 UBE2ZQ9H832 354 aaPredicted RBP4.31□□□□□ -1.72
SCFD1-208ENST00000553278 TMEM9BQ9NQ34 198 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 ABCB10Q9NRK6 738 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 V9GYY9 64 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 KIF26BQ2KJY2 2108 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 AK9Q5TCS8 1911 aa4.31□□□□□ -1.72
SCFD1-208ENST00000553278 MROH7Q68CQ1 1323 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 A6NDN8 102 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 H3BNH8 94 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 PRMT5O14744 637 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-208ENST00000553278 SLC31A2O15432 143 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 CRLF1O75462 422 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 C6orf47O95873 294 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 ICAM2P13598 275 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 F2RP25116 425 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 CSNK1DP48730 415 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 SERPINB8P50452 374 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 APOC4P55056 127 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 STX3Q13277 289 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 TFDP2Q14188 446 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 PRPSAP1Q14558 356 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 GPNMBQ14956 572 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 KIAA0040Q15053 153 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 NSDHLQ15738 373 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 KYAT1Q16773 422 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 CEP85LQ5SZL2 805 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 UTF1Q5T230 341 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 PAMR1Q6UXH9 720 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 WDR82Q6UXN9 313 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 C12orf54Q6X4T0 127 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 OAFQ86UD1 273 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 PNKDQ8N490 385 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 KIRREL3-AS3Q8N7Y1 241 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-208ENST00000553278 OR2G3Q8NGZ4 309 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 CCDC12Q8WUD4 166 aaPredicted RBP4.3□□□□□ -1.72
SCFD1-208ENST00000553278 APH1BQ8WW43 257 aa4.3□□□□□ -1.72
SCFD1-208ENST00000553278 TMEM230Q96A57 120 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 53.4 ms