RNA–Protein interactions for RNA: ENST00000550987.5

CPSF6-206, Transcript of cleavage and polyadenylation specific factor 6, humanhuman

TSL 4

Gene CPSF6, Length 560 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF6-206ENST00000550987 EMC3Q9P0I2 261 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 RSPH14Q9UHP6 348 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF639Q9UID6 485 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 TMCO1Q9UM00 188 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 ERVW-1Q9UQF0 538 aa4.12□□□□□ -1.75
CPSF6-206ENST00000550987 COL7A1Q02388 2944 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 FER1L5A0AVI2 2057 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 DYSFO75923 2080 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 LOC100506127A0A0U1RQW1 187 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 IQANK1A0A1B0GTG1 560 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 SMIM28A0A1B0GU29 152 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 A8MXQ7 604 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 TRDCB7Z8K6 153 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 ZNF253O75346 499 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CRLF1O75462 422 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 TBX6O95947 436 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-206ENST00000550987 MCF2P10911 925 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 GCFC2P16383 781 aaKnown RBP4.11□□□□□ -1.75
CPSF6-206ENST00000550987 IGHV1-2P23083 117 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 U2AF2P26368 475 aaKnown RBP eCLIP4.11□□□□□ -1.756e-8■■■□□ 18.6
CPSF6-206ENST00000550987 CHMLP26374 656 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CD1CP29017 333 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 GCKP35557 465 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 DUSP3P51452 185 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-206ENST00000550987 PKNOX1P55347 436 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 ASAH1Q13510 395 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 IL18Q14116 193 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 Q3ZCU0 254 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CLLU1OSQ5K130 101 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CARD17Q5XLA6 110 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 DNM1P46Q6ZS02 220 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 PAQR7Q86WK9 346 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 TRIM69Q86WT6 500 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CDR2LQ86X02 465 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-206ENST00000550987 ECHDC2Q86YB7 292 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 C12orf56Q8IXR9 622 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 SLC7A5P1Q8MH63 180 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 SYCE1Q8N0S2 351 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 C17orf47Q8NEP4 570 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 OR2L2Q8NH16 312 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CLHC1Q8NHS4 586 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 KCNG3Q8TAE7 436 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 MAGEE2Q8TD90 523 aaPredicted RBP4.11□□□□□ -1.75
CPSF6-206ENST00000550987 AGAP11Q8TF27 550 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 NR4A3Q92570 626 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 SGK3Q96BR1 496 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 FMO2Q99518 471 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 TRIM62Q9BVG3 475 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 CHIAQ9BZP6 476 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 MDFICQ9P1T7 246 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 RIMS3Q9UJD0 308 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 IKZF2Q9UKS7 526 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 ABCG2Q9UNQ0 655 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 MYH7P12883 1935 aa4.11□□□□□ -1.75
CPSF6-206ENST00000550987 PPIAL4EA0A075B759 164 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 LOC100131303A0A0U1RQF7 123 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 A0A1B0GUS0 222 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 MYBPHLA2RUH7 354 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 WRBO00258 174 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 LSM1O15116 133 aaKnown RBP4.1□□□□□ -1.75
CPSF6-206ENST00000550987 RNF13O43567 381 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 RAMP3O60896 148 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 CTAG2O75638 210 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 PPIAL4FP0DN26 164 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ETS2P15036 469 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 COX5AP20674 150 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 VDAC1P21796 283 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 NMT1P30419 496 aaKnown RBP4.1□□□□□ -1.75
CPSF6-206ENST00000550987 LEPP41159 167 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 CHRNB3Q05901 458 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ZFP36L1Q07352 338 aaKnown RBP4.1□□□□□ -1.75
CPSF6-206ENST00000550987 MRGPRG-AS1Q2M3A8 158 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 SLC22A10Q63ZE4 541 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 RNASEKQ6P5S7 137 aaKnown RBP4.1□□□□□ -1.75
CPSF6-206ENST00000550987 C2orf66Q6UXQ4 117 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 HSDL2Q6YN16 418 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 H2BFWTQ7Z2G1 175 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 TCAIMQ8N3R3 496 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 FGFRL1Q8N441 504 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 SPATA4Q8NEY3 305 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ERMNQ8TAM6 284 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ESR2Q92731 530 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 TSNARE1Q96NA8 513 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 CENPKQ9BS16 269 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 NMUR2Q9GZQ4 415 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 REEP4Q9H6H4 257 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ISG20L2Q9H9L3 353 aaKnown RBP4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ZFP14Q9HCL3 533 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 SPRR3Q9UBC9 169 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 ATPIF1Q9UII2 106 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 CA5BQ9Y2D0 317 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 CBY1Q9Y3M2 126 aa4.1□□□□□ -1.75
CPSF6-206ENST00000550987 DOCK5Q9H7D0 1870 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 DIDO1Q9BTC0 2240 aaKnown RBP4.09□□□□□ -1.75
CPSF6-206ENST00000550987 NOTCH3Q9UM47 2321 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 TCRBV9S1A1TA0A576 114 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 VSTM2BA6NLU5 285 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 FAM220BPB1ANY3 271 aa4.09□□□□□ -1.75
CPSF6-206ENST00000550987 IDSB3KWA1 339 aa4.09□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.5 ms