RNA–Protein interactions for RNA: ENST00000550406.1

RAB5C-206, Transcript of RAB5C, member RAS oncogene family, humanhuman

TSL 3

Gene RAB5C, Length 500 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB5C-206ENST00000550406 SLC35D3Q5M8T2 416 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 SLC25A30Q5SVS4 291 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 NCMAPQ5T1S8 102 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HIST2H3PS2Q5TEC6 136 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF691Q5VV52 312 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HIST2H3AQ71DI3 136 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 MEPCEQ7L2J0 689 aaKnown RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 TIGD4Q8IY51 512 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 FAM169BQ8N8A8 192 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 CPEB3Q8NE35 698 aaKnown RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 OR8J1Q8NGP2 316 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 OR6K6Q8NGW6 343 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 AKR7LQ8NHP1 331 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 RHOXF1Q8NHV9 184 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 TRUB1Q8WWH5 349 aaKnown RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 CYGBQ8WWM9 190 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 PLPPR2Q96GM1 343 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 MS4A3Q96HJ5 214 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 ZNF582Q96NG8 517 aaPredicted RBP11.34□□□□□ -0.59
RAB5C-206ENST00000550406 HS3ST6Q96QI5 342 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 ADI1Q9BV57 179 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 PRRG3Q9BZD7 231 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 WNT5BQ9H1J7 359 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 DNAJC27Q9NZQ0 273 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 MOKQ9UQ07 419 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 COMMD3-BMI1R4GMX3 469 aa11.34□□□□□ -0.59
RAB5C-206ENST00000550406 ANKHD1Q8IWZ3 2542 aaKnown RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 A6NNC1 897 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 H0YAE9 185 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 M0R1B8 84 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CASKO14936 926 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 PRODHO43272 600 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 ENTPD6O75354 484 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 UBL3O95164 117 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 PLAUP00749 431 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 HLA-DQA2P01906 255 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 GNAO1P09471 354 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CECR9P0C854 216 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CD40P25942 277 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 GSTT1P30711 240 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CAPGP40121 348 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 GUCA1AP43080 201 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 IDH3GP51553 393 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 BSPH1Q075Z2 132 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SPOCK1Q08629 439 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 GSG1Q2KHT4 349 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 C3orf36Q3SXR2 165 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SLC36A2Q495M3 483 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CCDC92Q53HC0 331 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 PABPC1L2AQ5JQF8 200 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 TEX30Q5JUR7 227 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 NXNL2Q5VZ03 156 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 TTC23Q5W5X9 447 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SLC18B1Q6NT16 456 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 TMEM53Q6P2H8 277 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CORO6Q6QEF8 472 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 USP51Q70EK9 711 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SSX8Q7RTT4 187 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 DPPA2Q7Z7J5 298 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SYT9Q86SS6 491 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 LINC00346Q8IVM7 164 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF555Q8NEP9 628 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SMAP2Q8WU79 429 aaPredicted RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 APH1BQ8WW43 257 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 NANOS1Q8WY41 292 aaKnown RBP11.33□□□□□ -0.6
RAB5C-206ENST00000550406 TFAP2CQ92754 450 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 OR2H1Q9GZK4 316 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 RASSF1Q9NS23 344 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 CYB5R1Q9UHQ9 305 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 PTPN13Q12923 2485 aa11.33□□□□□ -0.6
RAB5C-206ENST00000550406 SETXQ7Z333 2677 aaKnown RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 C12orf71A8MTZ7 269 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF593O00488 134 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 RER1O15258 196 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 SELENOFO60613 162 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 WBP4O75554 376 aaKnown RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 PAX7P23759 505 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 CALCRP30988 508 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ARR3P36575 388 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ENTPD1P49961 510 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 HCCSP53701 268 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ISL1P61371 349 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 AQP6Q13520 282 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 OCLNQ16625 522 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 RSPO1Q2MKA7 263 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 BEX5Q5H9J7 111 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 C6orf52Q5T4I8 152 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 LAIR2Q6ISS4 152 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 ZNF774Q6NX45 483 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 CFAP77Q6ZQR2 320 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 OR10H5Q8NGA6 315 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 OR10S1Q8NGN2 331 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 LILRB1Q8NHL6 650 aaPredicted RBP11.32□□□□□ -0.6
RAB5C-206ENST00000550406 PIK3IP1Q96FE7 263 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 MAP6Q96JE9 813 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 TMEM204Q9BSN7 226 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 WACQ9BTA9 647 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 KCNN2Q9H2S1 579 aa11.32□□□□□ -0.6
RAB5C-206ENST00000550406 RNF121Q9H920 327 aa11.32□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms