RNA–Protein interactions for RNA: ENST00000548786.1

DDX54-205, Transcript of DEAD-box helicase 54, humanhuman

TSL 2

Gene DDX54, Length 498 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX54-205ENST00000548786 DNAL1Q4LDG9 190 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 SLC35F1Q5T1Q4 408 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 OR2T5Q6IEZ7 315 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 RGS7BPQ6MZT1 257 aaPredicted RBP13.57□□□□□ -0.24
DDX54-205ENST00000548786 C1orf94Q6P1W5 598 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 ZNF620Q6ZNG0 422 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 FOXL2NBQ6ZUU3 175 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 ADCK1Q86TW2 530 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 SPATA24Q86W54 205 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 AQP11Q8NBQ7 271 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 SDR9C7Q8NEX9 313 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 OR1J2Q8NGS2 313 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 OR2T29Q8NH02 315 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 SLC7A6OSQ96CW6 309 aaPredicted RBP13.57□□□□□ -0.24
DDX54-205ENST00000548786 NMNAT3Q96T66 252 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 NUAK2Q9H093 628 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 LRMDAQ9H2I8 198 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 C1orf198Q9H425 327 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 REEP1Q9H902 201 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 VSX1Q9NZR4 365 aaPredicted RBP13.57□□□□□ -0.24
DDX54-205ENST00000548786 TIMM10BQ9Y5J6 103 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 CR1P17927 2039 aa13.57□□□□□ -0.24
DDX54-205ENST00000548786 C12orf71A8MTZ7 269 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 FAM171A2A8MVW0 826 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 DCTN6O00399 190 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 KHDRBS3O75525 346 aaKnown RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 GASTP01350 101 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 IGFBP1P08833 259 aaPredicted RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 HIST1H1CP16403 213 aaKnown RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 GDI2P50395 445 aaKnown RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 PCBD1P61457 104 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 FLOT2Q14254 428 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 MEP1BQ16820 701 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 GLB1L2Q8IW92 636 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 ADGRG5Q8IZF4 528 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 OR10H5Q8NGA6 315 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 C10orf105Q8TEF2 133 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 CANT1Q8WVQ1 401 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 CHID1Q9BWS9 393 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 PLA2G12AQ9BZM1 189 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 RAB1BQ9H0U4 201 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 SRA1Q9HD15 236 aaKnown RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 RPRD1BQ9NQG5 326 aaKnown RBP13.56□□□□□ -0.24
DDX54-205ENST00000548786 POLR1DQ9Y2S0 133 aa13.56□□□□□ -0.24
DDX54-205ENST00000548786 RTTNQ86VV8 2226 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 DHRS12A0PJE2 317 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 LYNX1G3V0Z9 82 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 M0R233 179 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 AHCYL1O43865 530 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 DOK2O60496 412 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 DNAJC8O75937 253 aaPredicted RBP13.55□□□□□ -0.24
DDX54-205ENST00000548786 SOX14O95416 240 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 SNAP29O95721 258 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 TXNDC12O95881 172 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 LYNX1P0DP58 116 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 RAP2AP10114 183 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 NAT2P11245 290 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 PCSK6P29122 969 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 WNT5AP41221 380 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 UCP2P55851 309 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 TRAP1Q12931 704 aaKnown RBP13.55□□□□□ -0.24
DDX54-205ENST00000548786 NKPD1Q17RQ9 610 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 ZNF101Q8IZC7 436 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 OR52L1Q8NGH7 329 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 OR8D4Q8NGM9 314 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 OR1J1Q8NGS3 322 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 C11orf40Q8WZ69 217 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 POM121L2Q96KW2 1035 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 TBC1D23Q9NUY8 699 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 ASH2LQ9UBL3 628 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 REV1Q9UBZ9 1251 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 CDH10Q9Y6N8 788 aa13.55□□□□□ -0.24
DDX54-205ENST00000548786 SYNGR3O43761 229 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 RENP00797 406 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 CST1P01037 141 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 ERCC1P07992 297 aaPredicted RBP13.54□□□□□ -0.24
DDX54-205ENST00000548786 DAOP14920 347 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 RAD52P43351 418 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 HTR5AP47898 357 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 PDLIM4P50479 330 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 HMGA2P52926 109 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 KLF3P57682 345 aaPredicted RBP13.54□□□□□ -0.24
DDX54-205ENST00000548786 DSCR9P59020 149 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 KRTAP1-1Q07627 177 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 GGTLC2Q14390 218 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 MICAQ29983 383 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 ZNF770Q6IQ21 691 aaPredicted RBP13.54□□□□□ -0.24
DDX54-205ENST00000548786 RFPL4BQ6ZWI9 263 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 ALDH16A1Q8IZ83 802 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 CYB561A3Q8NBI2 242 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 OR10G2Q8NGC3 310 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 OR52E2Q8NGJ4 325 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 ABHD4Q8TB40 342 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 SYNPRQ8TBG9 265 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 SLC7A6Q92536 515 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 GTF3AQ92664 365 aaKnown RBP13.54□□□□□ -0.24
DDX54-205ENST00000548786 TAAR3PQ9P1P4 343 aa13.54□□□□□ -0.24
DDX54-205ENST00000548786 EIF3KQ9UBQ5 218 aaKnown RBP13.54□□□□□ -0.24
DDX54-205ENST00000548786 OR6C68A6NDL8 312 aa13.53□□□□□ -0.24
DDX54-205ENST00000548786 AQP12BA6NM10 295 aa13.53□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 44.8 ms