RNA–Protein interactions for RNA: ENST00000548650.1

CHMP1A-205, Transcript of charged multivesicular body protein 1A, humanhuman

TSL 3

Gene CHMP1A, Length 566 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP1A-205ENST00000548650 NGFP01138 241 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 MSR1P21757 451 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 GCH1P30793 250 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 SLC9A3P48764 834 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 RAP1BP61224 184 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 PPP1CBP62140 327 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 LCN6P62502 163 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 RAP1AP62834 184 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 LIPEQ05469 1076 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 HFEQ30201 348 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 ANKDD1AQ495B1 522 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF774Q6NX45 483 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 UNQ6126/PRO20091Q6UXV3 157 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 OAFQ86UD1 273 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 ACOT11Q8WXI4 607 aaPredicted RBP14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 RAB39BQ96DA2 213 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 ELMOD3Q96FG2 381 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 FNDC11Q9BVV2 318 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 OCEL1Q9H607 264 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 CCDC134Q9H6E4 229 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 POLE4Q9NR33 117 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 AP3M1Q9Y2T2 418 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 TIMM10BQ9Y5J6 103 aa14.77□□□□□ -0.05
CHMP1A-205ENST00000548650 A0A087WUU8 490 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 A0A0A6YYJ9 748 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 PLSCR5A0PG75 271 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 CXCR6O00574 342 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 CDC42EP2O14613 210 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 MPZL1O95297 269 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF682O95780 498 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 AVPP01185 164 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 SCG5P05408 212 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF26P17031 533 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 GPR4P46093 362 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 SLC7A2P52569 658 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 PCBD1P61457 104 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 GUCY1A3Q02108 690 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 IFI44LQ53G44 452 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 MESTQ5EB52 335 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 ACSM5Q6NUN0 579 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 C8orf82Q6P1X6 216 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 THSD4Q6ZMP0 1018 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 RP9Q8TA86 221 aaKnown RBP14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 TIMD4Q96H15 378 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 HSH2DQ96JZ2 352 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 CGGBP1Q9UFW8 167 aaPredicted RBP14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 ADAM18Q9Y3Q7 739 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 ARHGAP32A7KAX9 2087 aa14.76□□□□□ -0.05
CHMP1A-205ENST00000548650 LOC105371242A0A075B767 164 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 PLPP2O43688 288 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 UBOX5O94941 541 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 SCGB2A2Q13296 93 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 SPRNQ5BIV9 151 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 FAHD2BQ6P2I3 314 aaPredicted RBP14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 ZNF730Q6ZMV8 503 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 MBOAT2Q6ZWT7 520 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 CBLL1Q75N03 491 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 FAM122BQ7Z309 247 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 TSEN54Q7Z6J9 526 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 SYT9Q86SS6 491 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 C1orf174Q8IYL3 243 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 ALDH16A1Q8IZ83 802 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 RNF113BQ8IZP6 322 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 ZFAND2BQ8WV99 257 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 FAHD2AQ96GK7 314 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 C4orf45Q96LM5 186 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 TMPRSS13Q9BYE2 586 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 EMC7Q9NPA0 242 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 CYSLTR2Q9NS75 346 aa14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 NDRG4Q9ULP0 352 aaKnown RBP14.75□□□□□ -0.05
CHMP1A-205ENST00000548650 DYSFO75923 2080 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 A0A0G2JMP0 313 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 A0A0X1KG70 313 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 C12orf71A8MTZ7 269 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 SERPINA1P01009 418 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 CD55P08174 381 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 CD14P08571 375 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 COX4I1P13073 169 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 ANPEPP15144 967 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 EPHA1P21709 976 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 GSK3BP49841 420 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 HNRNPA0Q13151 305 aaKnown RBP14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 TBPL2Q6SJ96 375 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 TMPRSS11FQ6ZWK6 438 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 OR4M2Q8NGB6 313 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 CCL17Q92583 94 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 RAB1CQ92928 201 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 Q96M85 177 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 POFUT1Q9H488 388 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 KLHL21Q9UJP4 597 aa14.74□□□□□ -0.05
CHMP1A-205ENST00000548650 DOK2O60496 412 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 RGS9O75916 674 aaPredicted RBP14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 COX5BP10606 129 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 CTLA4P16410 223 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 RPL4P36578 427 aaKnown RBP14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 LIPAP38571 399 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 GUCA1AP43080 201 aaPredicted RBP14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 ZMAT1Q5H9K5 638 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 C1QL2Q7Z5L3 287 aa14.73□□□□□ -0.05
CHMP1A-205ENST00000548650 TEX29Q8N6K0 151 aa14.73□□□□□ -0.05
Retrieved 100 of 20,778 RNA–protein pairs in 34.4 ms