RNA–Protein interactions for RNA: ENST00000548436.5

PRPF40B-208, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

TSL 2

Gene PRPF40B, Length 2,059 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-208ENST00000548436 FOXK1P85037 733 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC25A53Q5H9E4 307 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 OLFML2AQ68BL7 652 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 MRPL14Q6P1L8 145 aaKnown RBP16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 ANKRD16Q6P6B7 361 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 DNM1P34Q6PK57 102 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 UBALD2Q8IYN6 164 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 C9orf62Q8N4C0 152 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 PLPP7Q8NBV4 271 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 DACT3Q96B18 629 aaPredicted RBP16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 POTEKPQ9BYX7 375 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 OR10A4Q9H209 315 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 METTL7AQ9H8H3 244 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 PRDM6Q9NQX0 595 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 ALKBH4Q9NXW9 302 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 WIF1Q9Y5W5 379 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 R4GMQ9 66 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC17A2O00624 439 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 OPN1LWP04000 364 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 SULT1A3P0DMM9 295 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 SULT1A4P0DMN0 295 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 ANXA3P12429 323 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 MSX1P28360 303 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 HOXA6P31267 233 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 VEGFCP49767 419 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 MYBPHQ13203 477 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 C2orf76Q3KRA6 126 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 FAM166AQ6J272 317 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 CORO6Q6QEF8 472 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 OR5M1Q8NGP8 315 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 IFI44Q8TCB0 444 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 C15orf40Q8WUR7 153 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 MRGPRX4Q96LA9 322 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 G6PC2Q9NQR9 355 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 SERINC1Q9NRX5 453 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 TAS2R4Q9NYW5 299 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 B3GAT1Q9P2W7 334 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 B3GALT1Q9Y5Z6 326 aa16.57■□□□□ 0.24
PRPF40B-208ENST00000548436 MED12Q93074 2177 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 COL6A3P12111 3177 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 IGLV3-32A0A0A0MS00 114 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 DKK1O94907 266 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 BIDP55957 195 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 RAB11BQ15907 218 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 C6orf183Q5T699 404 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 NHLRC1Q6VVB1 395 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 FGD2Q7Z6J4 655 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 NAT6Q93015 286 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 FAM3DQ96BQ1 224 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 FANCFQ9NPI8 374 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 FBXL2Q9UKC9 423 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 B3GALT5Q9Y2C3 310 aa16.56■□□□□ 0.24
PRPF40B-208ENST00000548436 ARPC4-TTLL3A0A0A6YYG9 625 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 GGT3PA6NGU5 568 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 AQP8O94778 261 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 TPPPO94811 219 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 PDGFBP01127 241 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 ALDOBP05062 364 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 CFIP05156 583 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 ZNF28P17035 718 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 IGFBP3P17936 291 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 LINC00303Q3SY05 128 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 LRFN4Q6PJG9 635 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 OR11H4Q8NGC9 324 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 OR1J4Q8NGS1 313 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 RASL10BQ96S79 203 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 TMEM185BQ9H7F4 350 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 C19orf25Q9UFG5 118 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 ING4Q9UNL4 249 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 LOC101059948A0A1B0GTJ6 334 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 CIB4A0PJX0 185 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 TTLL8A6PVC2 850 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 ARPC1BO15143 372 aaKnown RBP16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 SSNA1O43805 119 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 KDM4BO94953 1096 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 ZP1P60852 638 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 PIAS4Q8N2W9 510 aaPredicted RBP16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 OR2M3Q8NG83 312 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 GRPEL2Q8TAA5 225 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC22A8Q8TCC7 542 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC25A28Q96A46 364 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 CMKLR1Q99788 373 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 DEFB126Q9BYW3 111 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 SDHAF3Q9NRP4 125 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 OR52A1Q9UKL2 312 aa16.55■□□□□ 0.24
PRPF40B-208ENST00000548436 MEIKINA0A087WXM9 373 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 LOC100289279A0A1B0GTE1 492 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 TMEM272A0A1B0GTI8 110 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 A0A1W2PNV4 684 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 A0A1W2PQ72 361 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 CD2P06729 351 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 FGF5P12034 268 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 TDGF1P13385 188 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 GALK2Q01415 458 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 Q6ZTK2 550 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 WDR5BQ86VZ2 330 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 OR51A2Q8NGJ7 313 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 EDAQ92838 391 aa16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 SPACA9Q96E40 222 aaPredicted RBP16.54■□□□□ 0.24
PRPF40B-208ENST00000548436 SLC25A44Q96H78 314 aaPredicted RBP16.54■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 42.3 ms