RNA–Protein interactions for RNA: ENST00000546296.5

LTBR-215, Transcript of lymphotoxin beta receptor, humanhuman

TSL 4

Gene LTBR, Length 783 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBR-215ENST00000546296 RACGAP1Q9H0H5 632 aa14.59□□□□□ -0.07
LTBR-215ENST00000546296 C1orf198Q9H425 327 aa14.59□□□□□ -0.07
LTBR-215ENST00000546296 CDH20Q9HBT6 801 aa14.59□□□□□ -0.07
LTBR-215ENST00000546296 CMC2Q9NRP2 79 aa14.59□□□□□ -0.07
LTBR-215ENST00000546296 LAMP3Q9UQV4 416 aa14.59□□□□□ -0.07
LTBR-215ENST00000546296 VSTM5A8MXK1 200 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 CD53P19397 219 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 PAICSP22234 425 aaKnown RBP14.58□□□□□ -0.08
LTBR-215ENST00000546296 IGFBP5P24593 272 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 SLC25A1P53007 311 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 LSM6P62312 80 aaKnown RBP14.58□□□□□ -0.08
LTBR-215ENST00000546296 ESRRGP62508 458 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 CDK5Q00535 292 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 PSG4Q00888 419 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 DAG1Q14118 895 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 TBC1D28Q2M2D7 210 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 TMEM236Q5W0B7 351 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 KDM4DQ6B0I6 523 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 B3GLCTQ6Y288 498 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 ZNF584Q8IVC4 421 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 TMEM171Q8WVE6 324 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 DDOQ99489 341 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 RBM4BQ9BQ04 359 aaKnown RBP14.58□□□□□ -0.08
LTBR-215ENST00000546296 RBM4Q9BWF3 364 aaKnown RBP14.58□□□□□ -0.08
LTBR-215ENST00000546296 CDADC1Q9BWV3 514 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 OSBPL10Q9BXB5 764 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 OR2H1Q9GZK4 316 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 ENOPH1Q9UHY7 261 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 SPG11Q96JI7 2443 aa14.58□□□□□ -0.08
LTBR-215ENST00000546296 MAST4O15021 2626 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 ANKRD17O75179 2603 aaKnown RBP14.57□□□□□ -0.08
LTBR-215ENST00000546296 GAAP10253 952 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 CCL2P13500 99 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 ZNF823P16415 610 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 CCNOP22674 350 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 STOMP27105 288 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 APEX1P27695 318 aaKnown RBP14.57□□□□□ -0.08
LTBR-215ENST00000546296 GDI2P50395 445 aaKnown RBP14.57□□□□□ -0.08
LTBR-215ENST00000546296 TEKQ02763 1124 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 HGFACQ04756 655 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 SCRN3Q0VDG4 424 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 AQP6Q13520 282 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 PTGES3Q15185 160 aaKnown RBP14.57□□□□□ -0.08
LTBR-215ENST00000546296 KCNMB1Q16558 191 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 MEP1BQ16820 701 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 AGAP6Q5VW22 663 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 KRT80Q6KB66 452 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 ZNF774Q6NX45 483 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 CPEB3Q8NE35 698 aaKnown RBP14.57□□□□□ -0.08
LTBR-215ENST00000546296 OR51L1Q8NGJ5 315 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 WNT5BQ9H1J7 359 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 SLC25A19Q9HC21 320 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 TVP23BQ9NYZ1 205 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 ASH2LQ9UBL3 628 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 ORC6Q9Y5N6 252 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 NAV2Q8IVL1 2488 aa14.57□□□□□ -0.08
LTBR-215ENST00000546296 FAM183AA6NL82 134 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 PRR23D1E9PI22 279 aaPredicted RBP14.56□□□□□ -0.08
LTBR-215ENST00000546296 SURF4O15260 269 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 TFP02787 698 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 GYPBP06028 91 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 SOD3P08294 240 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 PRR23D2P0DMB1 279 aaPredicted RBP14.56□□□□□ -0.08
LTBR-215ENST00000546296 ZNF35P13682 527 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 SPI1P17947 270 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 NR4A1P22736 598 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 FMO3P31513 532 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 APOBEC3AP31941 199 aaPredicted RBP14.56□□□□□ -0.08
LTBR-215ENST00000546296 TTKP33981 857 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 SNTB2Q13425 540 aaKnown RBP14.56□□□□□ -0.08
LTBR-215ENST00000546296 SNAPC1Q16533 368 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 ZNF544Q6NX49 715 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 PQLC1Q8N2U9 271 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 NUP37Q8NFH4 326 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 SLC26A10Q8NG04 563 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 CIB1Q99828 191 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 PRRG3Q9BZD7 231 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 RIBC2Q9H4K1 309 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 CXorf56Q9H5V9 222 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 MED20Q9H944 212 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 CA10Q9NS85 328 aa14.56□□□□□ -0.08
LTBR-215ENST00000546296 BEX4Q9NWD9 120 aaPredicted RBP14.56□□□□□ -0.08
LTBR-215ENST00000546296 C5orf49A4QMS7 147 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 TVP23AA6NH52 213 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 SGCEO43556 437 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 SMPD2O60906 423 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 DANCRP0C864 163 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 CLUP10909 449 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 THBS4P35443 961 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 PPP2R2BQ00005 443 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 DEFB113Q30KQ7 82 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 PLBD1Q6P4A8 553 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 MUC15Q8N387 334 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 GJC3Q8NFK1 279 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 OR6K6Q8NGW6 343 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 OR2AJ1Q8NGZ0 328 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 MBD6Q96DN6 1003 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 C9orf16Q9BUW7 83 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 NMNAT2Q9BZQ4 307 aa14.55□□□□□ -0.08
LTBR-215ENST00000546296 OR51V1Q9H2C8 321 aa14.55□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms