RNA–Protein interactions for RNA: ENST00000546164.5

YBX3-217, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 805 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-217ENST00000546164 CRABP1P29762 137 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 APLNRP35414 380 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 RASSF2P50749 326 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 FLOT2Q14254 428 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 MICAQ29983 383 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 GLB1L2Q8IW92 636 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 ALDH16A1Q8IZ83 802 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SVOPLQ8N434 492 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 POM121L2Q96KW2 1035 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SAMD8Q96LT4 415 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 SORCS2Q96PQ0 1159 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 IFT27Q9BW83 186 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 ZNF416Q9BWM5 594 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 DGCR6LQ9BY27 220 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 CADM1Q9BY67 442 aaKnown RBP10.22□□□□□ -0.77
YBX3-217ENST00000546164 BCL2L14Q9BZR8 327 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 NUAK2Q9H093 628 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 WNT5BQ9H1J7 359 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 GSX1Q9H4S2 264 aaPredicted RBP10.22□□□□□ -0.77
YBX3-217ENST00000546164 FKBP7Q9Y680 259 aa10.22□□□□□ -0.77
YBX3-217ENST00000546164 IGLV1-36A0A0B4J1U3 117 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 TCRBV3S1A0A5B6 114 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 BHLHE40O14503 412 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 SLC16A7O60669 478 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 COX5BP10606 129 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 CCL2P13500 99 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 GSTM3P21266 225 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 APEX1P27695 318 aaKnown RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 RAD52P43351 418 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 UCP2P55851 309 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 LSM6P62312 80 aaKnown RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 SCRN3Q0VDG4 424 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 PPP1R8Q12972 351 aaKnown RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 KCNMB1Q16558 191 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 DNM1P34Q6PK57 102 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 CLEC2AQ6UVW9 174 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 UGT2A3Q6UWM9 527 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 CD300LDQ6UXZ3 194 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 C1orf174Q8IYL3 243 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 AQP11Q8NBQ7 271 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 PAPD5Q8NDF8 572 aaKnown RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 OR52L1Q8NGH7 329 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 AKR7LQ8NHP1 331 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 REG4Q9BYZ8 158 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 MRPL37Q9BZE1 423 aaKnown RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 RACGAP1Q9H0H5 632 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 RAB1BQ9H0U4 201 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 MYOZ1Q9NP98 299 aaPredicted RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 EMC7Q9NPA0 242 aa10.21□□□□□ -0.77
YBX3-217ENST00000546164 COA3Q9Y2R0 106 aaPredicted RBP10.21□□□□□ -0.77
YBX3-217ENST00000546164 IGLV3-9A0A075B6K5 115 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 LOC100509620A0A075B734 347 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 IGHV4-30-2A0A087WSY4 118 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 A0A096LNT2 108 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 M0R233 179 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 NDUFS8O00217 210 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 DCTN6O00399 190 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 SYNGR3O43761 229 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 RENP00797 406 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 CST1P01037 141 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 HEXAP06865 529 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 FAM157BP0CG42 384 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 GAAP10253 952 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 ZNF250P15622 560 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 HIST1H1CP16403 213 aaKnown RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 NOS3P29474 1203 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 GDI2P50395 445 aaKnown RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 RIPPLY3P57055 190 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 COX10Q12887 443 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 AQP6Q13520 282 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 RGS7BPQ6MZT1 257 aaPredicted RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 LEG1Q6P5S2 330 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 UNQ6126/PRO20091Q6UXV3 157 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 ZBTB46Q86UZ6 589 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 JAZF1Q86VZ6 243 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 SPATA24Q86W54 205 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 OR6V1Q8N148 313 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 LNX2Q8N448 690 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 ZNF525Q8N782 197 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 OR10G2Q8NGC3 310 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 OR8D4Q8NGM9 314 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 OR4K13Q8NH42 304 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 C10orf105Q8TEF2 133 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 NEU4Q8WWR8 484 aaPredicted RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 NMNAT3Q96T66 252 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 DDOQ99489 341 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 SMR3AQ99954 134 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 VRK1Q99986 396 aaPredicted RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 RHNO1Q9BSD3 238 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 PLA2G12AQ9BZM1 189 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 MMADHCQ9H3L0 296 aaPredicted RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 MS4A5Q9H3V2 200 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 EGLN3Q9H6Z9 239 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 YY1AP1Q9H869 796 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 DYNLRB1Q9NP97 96 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 ATPIF1Q9UII2 106 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 NDRG4Q9ULP0 352 aaKnown RBP10.2□□□□□ -0.78
YBX3-217ENST00000546164 B9D1Q9UPM9 204 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 U3KQV3 271 aa10.2□□□□□ -0.78
YBX3-217ENST00000546164 FN1P02751 2386 aaKnown RBP10.19□□□□□ -0.78
Retrieved 100 of 20,778 RNA–protein pairs in 39.1 ms