RNA–Protein interactions for RNA: ENST00000545920.1

SNHG1-225, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2

Gene SNHG1, Length 625 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-225ENST00000545920 NPIPA7E9PJI5 369 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 H0YIG0 161 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 GOSR2O14653 212 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TSPAN4O14817 238 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 LDLRAD4O15165 306 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ARPC5O15511 151 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF264O43296 627 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 FOXS1O43638 330 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RAD1O60671 282 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TNFP01375 233 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 IGKV1D-16P01601 117 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 STATHP02808 62 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ISG15P05161 165 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ERCC1P07992 297 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 OR4E1P0C645 316 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 NPIPA8P0DM63 369 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 OR8G3PP0DMU2 310 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CT45A8P0DMV1 189 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CT45A9P0DMV2 189 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF35P13682 527 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 HPGDP15428 266 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 GLB1P16278 677 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PSMB10P40306 273 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CDKN2AP42771 156 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ID4P47928 161 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 POU3F4P49335 361 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 STARP49675 285 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RIDAP52758 137 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 H2BFSP57053 126 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RAP1BP61224 184 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RAP1AP62834 184 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 S100A12P80511 92 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 MRPS21P82921 87 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SKP2Q13309 424 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 GPR18Q14330 331 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF169Q14929 603 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SGCBQ16585 318 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PAN3Q58A45 887 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CT45A2Q5DJT8 189 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RNASE12Q5GAN4 147 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SFRP5Q5T4F7 317 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PXDC1Q5TGL8 231 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM244Q5VVB8 128 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 NKAIN2Q5VXU1 208 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 FCRLBQ6BAA4 426 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ADGRE4PQ86SQ3 457 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF546Q86UE3 836 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SLC25A42Q86VD7 318 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 MISPQ8IVT2 679 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 BEST3Q8N1M1 668 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ARMC10Q8N2F6 343 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SVBPQ8N300 66 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 MUC20Q8N307 709 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ARL14Q8N4G2 192 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RFLNBQ8N5W9 214 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 FRMD1Q8N878 549 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 BCORP1Q8N888 145 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 COQ8AQ8NI60 647 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 STOML3Q8TAV4 291 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TSEN15Q8WW01 171 aaKnown RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 WFDC12Q8WWY7 111 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ST8SIA2Q92186 375 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CLIP3Q96DZ5 547 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TCTN2Q96GX1 697 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 Q96M85 177 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 LINC00052Q96N35 136 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SLC38A3Q99624 504 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 UQCC2Q9BRT2 126 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF416Q9BWM5 594 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SLC25A18Q9H1K4 315 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 OR10A5Q9H207 317 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TMEM138Q9NPI0 162 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PRTFDC1Q9NRG1 225 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 CPNE7Q9UBL6 633 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 SHPKQ9UHJ6 478 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 IKZF2Q9UKS7 526 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 RAB22AQ9UL26 194 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 TNFSF18Q9UNG2 199 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 DHDHQ9UQ10 334 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PRELID3BQ9Y3B1 194 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ADAM18Q9Y3Q7 739 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF175Q9Y473 711 aa5.83□□□□□ -1.48
SNHG1-225ENST00000545920 KLF2Q9Y5W3 355 aaPredicted RBP5.83□□□□□ -1.48
SNHG1-225ENST00000545920 PLXND1Q9Y4D7 1925 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 TRAV18A0A075B6X5 111 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 TRBV6-7A0A0A0MS04 114 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 OR6C76A6NM76 312 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 GRXCR1A8MXD5 290 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 ZNF736B4DX44 427 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-225ENST00000545920 C10orf142B7Z368 130 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 TO15178 435 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 LATO43561 262 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 OR2T1O43869 369 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 HRGP04196 525 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 GP1BAP07359 652 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 CHRM2P08172 466 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 IGFBP3P17936 291 aaPredicted RBP5.82□□□□□ -1.48
SNHG1-225ENST00000545920 PGCP20142 388 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 CNR1P21554 472 aa5.82□□□□□ -1.48
SNHG1-225ENST00000545920 HTR2CP28335 458 aa5.82□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms