RNA–Protein interactions for RNA: ENST00000545688.5

SNHG1-224, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3

Gene SNHG1, Length 610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-224ENST00000545688 KMT2CQ8NEZ4 4911 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 FLNAP21333 2647 aaKnown RBP2.37□□□□□ -2.03
SNHG1-224ENST00000545688 MYO7BQ6PIF6 2116 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 IGHV1OR21-1A0A087WYE8 117 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 RNF222A6NCQ9 220 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 OR6C65A6NJZ3 312 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 FAM74A7A6NL05 159 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 LRRC30A6NM36 301 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 LRRIQ3A6PVS8 624 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-224ENST00000545688 ZMPSTE24O75844 475 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 CD160O95971 181 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 FGF1P05230 155 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 CD99P14209 185 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 CRISP2P16562 243 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 CASP4P49662 377 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 AP3M2P53677 418 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 DAOAP59103 153 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 RPA4Q13156 261 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 LASP1Q14847 261 aaKnown RBP2.36□□□□□ -2.03
SNHG1-224ENST00000545688 NDUFA9Q16795 377 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 FAM74A3Q4VXF1 159 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 C1orf146Q5VVC0 180 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 RFLNAQ6ZTI6 216 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF683Q8IZ20 524 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 ST6GALNAC3Q8NDV1 305 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 OR2L8Q8NGY9 312 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 OR6X1Q8NH79 312 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 KIAA1143Q96AT1 154 aaPredicted RBP2.36□□□□□ -2.03
SNHG1-224ENST00000545688 OR5B2Q96R09 309 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 MED10Q9BTT4 135 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 ULBP1Q9BZM6 244 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 CYP3A43Q9HB55 503 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 MID1IP1Q9NPA3 183 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 INPP5EQ9NRR6 644 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 AGPAT3Q9NRZ7 376 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 DMAC2Q9NW81 257 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 SLC39A1Q9NY26 324 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 RYR3Q15413 4870 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 TLN2Q9Y4G6 2542 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 ZGRF1Q86YA3 2104 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 MYH11P35749 1972 aa2.36□□□□□ -2.03
SNHG1-224ENST00000545688 PRKDCP78527 4128 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 MXRA5Q9NR99 2828 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 A0A0U1RQS6 177 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CXorf51AA0A1B0GTR3 108 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 A0A1B0GUH1 482 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 HELTA6NFD8 242 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 C21orf140B9A014 251 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 H3BMQ9 156 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 K7ERQ8 282 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 SULT2B1O00204 365 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 XPO1O14980 1071 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 DPM1O60762 260 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 PLEKP08567 350 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 HBQ1P09105 142 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 TNNI1P19237 187 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 EXOSC2Q13868 293 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 TIGITQ495A1 244 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CHCHD2P9Q5T1J5 151 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 SPECC1LQ69YQ0 1117 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 SPOPLQ6IQ16 392 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 Q6ZS92 163 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 TMEM26Q6ZUK4 368 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 GKN2Q86XP6 184 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 BATF2Q8N1L9 274 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 LINC01561Q8N1V8 128 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 ZNF615Q8N8J6 731 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CCDC112Q8NEF3 446 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 ANKRD20A12PQ8NF67 263 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 FDCSPQ8NFU4 85 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 OR52E1Q8NGJ3 308 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CCL4L1Q8NHW4 92 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CNIH3Q8TBE1 160 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 DQX1Q8TE96 717 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 PAQR8Q8TEZ7 354 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 AENQ8WTP8 325 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 UBE2Q2Q8WVN8 375 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 ATP6V1E2Q96A05 226 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 CCDC127Q96BQ5 260 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 PDXPQ96GD0 296 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 C8orf76Q96K31 380 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 FOXC2Q99958 501 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 LLPHQ9BRT6 129 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 HDHD3Q9BSH5 251 aaPredicted RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 NUDT9Q9BW91 350 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 SYNDIG1Q9H7V2 258 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 MCCC2Q9HCC0 563 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 KCNN3Q9UGI6 736 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 NOL7Q9UMY1 257 aaKnown RBP2.35□□□□□ -2.03
SNHG1-224ENST00000545688 ASF1AQ9Y294 204 aa2.35□□□□□ -2.03
SNHG1-224ENST00000545688 TNRC6AQ8NDV7 1962 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 ZANQ9Y493 2812 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 MDC1Q14676 2089 aaKnown RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 NCOA6Q14686 2063 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 A0A0D9SEW6 157 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 TSPAN11A1L157 253 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 C19orf84I3L1E1 186 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 KPNA3O00505 521 aaPredicted RBP2.34□□□□□ -2.03
SNHG1-224ENST00000545688 CLDN11O75508 207 aa2.34□□□□□ -2.03
SNHG1-224ENST00000545688 TNFSF13O75888 250 aa2.34□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 49.6 ms