RNA–Protein interactions for RNA: ENST00000545540.5

USP28-214, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2 BASIC

Gene USP28, Length 3,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-214ENST00000545540 CSNK1EP49674 416 aaKnown RBP13.51□□□□□ -0.25
USP28-214ENST00000545540 DLX5P56178 289 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 RAP2BP61225 183 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 UBXN2BQ14CS0 331 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ELP2Q6IA86 826 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ATRAIDQ6UW56 229 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 DCXRQ7Z4W1 244 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 GABRG1Q8N1C3 465 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 RPS4Y2Q8TD47 263 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 WNT2BQ93097 391 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 OR8B4Q96RC9 309 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 DPYSL5Q9BPU6 564 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 FOXQ1Q9C009 403 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 GPR160Q9UJ42 338 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 PLCL2Q9UPR0 1127 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 TMED7Q9Y3B3 224 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 BGLAPP02818 100 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 CSRP1P21291 193 aaKnown RBP13.51□□□□□ -0.25
USP28-214ENST00000545540 ANOS1P23352 680 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ABCD3P28288 659 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 OR7A5Q15622 319 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 OR13C3Q8NGS6 347 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ZNF721Q8TF20 911 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 NUDCD2Q8WVJ2 157 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ADIPOR1Q96A54 375 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 WDR13Q9H1Z4 485 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 SHISA7A6NL88 538 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 RP2O75695 350 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 GP1BBP13224 206 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 FOLR1P15328 257 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 IGLV3-21P80748 117 aaPredicted RBP13.51□□□□□ -0.25
USP28-214ENST00000545540 MRPS21P82921 87 aaKnown RBP13.51□□□□□ -0.25
USP28-214ENST00000545540 KCTD20Q7Z5Y7 419 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ADGRG3Q86Y34 549 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 OR4D6Q8NGJ1 314 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 SEH1LQ96EE3 360 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ZNF75AQ96N20 296 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 ASPMQ8IZT6 3477 aa13.51□□□□□ -0.25
USP28-214ENST00000545540 TRIOBPQ9H2D6 2365 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 A0A1W2PPC4 97 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 FAM221BA6H8Z2 402 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 APOC3P02656 99 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 AKAIN1P0CW23 69 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 PTGS2P35354 604 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 DNASE1L1P49184 302 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 CCINQ13939 588 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 TMEM81Q6P7N7 255 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 ZNF679Q8IYX0 411 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 WBP1Q96G27 269 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 REG4Q9BYZ8 158 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 SLC19A3Q9BZV2 496 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 PTGES2Q9H7Z7 377 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 MED11Q9P086 117 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 SULT1B1O43704 296 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 OR2A4O95047 310 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 HTR2CP28335 458 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 AVPR2P30518 371 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 FBXW4P57775 412 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 SKP1P63208 163 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 C3orf33Q6P1S2 294 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 ARSKQ6UWY0 536 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 GSG1LQ6UXU4 331 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 KCTD9Q7L273 389 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 PHYHIPQ92561 330 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 NARS2Q96I59 477 aaKnown RBP13.5□□□□□ -0.25
USP28-214ENST00000545540 OR2A7Q96R45 310 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 PDCD10Q9BUL8 212 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 APMAPQ9HDC9 416 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 MSRAQ9UJ68 235 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 HRH3Q9Y5N1 445 aa13.5□□□□□ -0.25
USP28-214ENST00000545540 OR4E1P0C645 316 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 NUP62P37198 522 aaPredicted RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 GABRA4P48169 554 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 RPL27P61353 136 aaKnown RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 EBPQ15125 230 aaKnown RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 SLC18B1Q6NT16 456 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 CFAP77Q6ZQR2 320 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 SPICQ8N5J4 248 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 CLEC1AQ8NC01 280 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 OR1L3Q8NH93 324 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 FGGYQ96C11 551 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 SLC6A7Q99884 636 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 PTTG3PQ9NZH4 202 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 NOP16Q9Y3C1 178 aaKnown RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 LOC100289279A0A1B0GTE1 492 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 CDK2AP1O14519 115 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 FAUP35544 74 aaKnown RBP13.49□□□□□ -0.25
USP28-214ENST00000545540 RASGEF1BQ0VAM2 473 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 CDNFQ49AH0 187 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 C1orf140Q5VVS0 124 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 CARD17Q5XLA6 110 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 ADAMTS18Q8TE60 1221 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 PNPLA2Q96AD5 504 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 LRFN5Q96NI6 719 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 MFRPQ9BY79 579 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 ADAM19Q9H013 955 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 AUP1Q9Y679 476 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 FER1L5A0AVI2 2057 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 MYO7BQ6PIF6 2116 aa13.49□□□□□ -0.25
USP28-214ENST00000545540 TMEM269A0A1B0GVZ9 245 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 208.7 ms