RNA–Protein interactions for RNA: ENST00000545440.5

SNHG1-223, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 2 BASIC

Gene SNHG1, Length 754 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-223ENST00000545440 ALG10Q5BKT4 473 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 C10orf128Q5T292 105 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 ARMC4Q5T2S8 1044 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 FAM205BPQ63HN1 556 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 SLC22A24Q8N4F4 322 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 FAM156AQ8NDB6 213 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 NUDT10Q8NFP7 164 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 C10orf105Q8TEF2 133 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 FAM162AQ96A26 154 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 DACT3Q96B18 629 aaPredicted RBP6.62□□□□□ -1.35
SNHG1-223ENST00000545440 BPIFA2Q96DR5 249 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 NUDT11Q96G61 164 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 AJUBAQ96IF1 538 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 SORCS2Q96PQ0 1159 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 ELAC2Q9BQ52 826 aaKnown RBP6.62□□□□□ -1.35
SNHG1-223ENST00000545440 FNDC11Q9BVV2 318 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 TXNIPQ9H3M7 391 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 ANKRD19PQ9H560 264 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 SLC7A8Q9UHI5 535 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 RPS6KA6Q9UK32 745 aa6.62□□□□□ -1.35
SNHG1-223ENST00000545440 DOCK11Q5JSL3 2073 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 INAFM1C9JVW0 142 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 hCG_2039718K7EN88 272 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 FFAR1O14842 300 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 CD5LO43866 347 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 TRMUO75648 421 aaKnown RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SNAP29O95721 258 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SERPINA5P05154 406 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ERCC1P07992 297 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 QDPRP09417 244 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SAGP10523 405 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 DRD4P21917 467 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 PCSK6P29122 969 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 THBS4P35443 961 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 GLRXP35754 106 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 EVX1P49640 407 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ZNF84P51523 738 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 PSME3P61289 254 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 RAB1AP62820 205 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 GALK2Q01415 458 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 PRKCDQ05655 676 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 RUNX1T1Q06455 604 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 PIGFQ07326 219 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SLC36A2Q495M3 483 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 KRT80Q6KB66 452 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 CPLX4Q7Z7G2 160 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 CYP4Z1Q86W10 505 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ZNF584Q8IVC4 421 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SKA3Q8IX90 412 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 NRMQ8IXM6 262 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 RNF113BQ8IZP6 322 aaKnown RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SVOPLQ8N434 492 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 MAPK1IP1LQ8NDC0 245 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 OR4K5Q8NGD3 323 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 MOSPD2Q8NHP6 518 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 FNDC8Q8TC99 324 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ACOT11Q8WXI4 607 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 HTRA1Q92743 480 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 MCHR2Q969V1 340 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 MRPL24Q96A35 216 aaKnown RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SLC7A6OSQ96CW6 309 aaPredicted RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 NMD3Q96D46 503 aaKnown RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ZNF347Q96SE7 839 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 PIMREGQ9BSJ6 248 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 ALG12Q9BV10 488 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 FAM107BQ9H098 131 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 RAB1BQ9H0U4 201 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 OR10A2Q9H208 303 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 C1orf198Q9H425 327 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SAMD4AQ9UPU9 718 aaKnown RBP6.61□□□□□ -1.35
SNHG1-223ENST00000545440 SNX13Q9Y5W8 968 aa6.61□□□□□ -1.35
SNHG1-223ENST00000545440 TRAV27A0A087WT01 109 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 LOC390937A0A1W2PQ73 354 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 A0A1W2PRQ8 180 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 A6NIZ1 184 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 EFCAB9A8MZ26 197 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 VWC2LB2RUY7 222 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 J3KTA2 159 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 M0R233 179 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 GPRIN2O60269 458 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 LY6HO94772 140 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 PTHP01270 115 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 HSD17B1P14061 328 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 NCK1P16333 377 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 MAKP20794 623 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 YAP1P46937 504 aaKnown RBP6.6□□□□□ -1.35
SNHG1-223ENST00000545440 PDLIM4P50479 330 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 RAP1BP61224 184 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 RPL27P61353 136 aaKnown RBP6.6□□□□□ -1.35
SNHG1-223ENST00000545440 RAP1AP62834 184 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 MRPS34P82930 218 aaKnown RBP6.6□□□□□ -1.35
SNHG1-223ENST00000545440 VLDLRP98155 873 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 CD47Q08722 323 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 DGCR6Q14129 220 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 RAB39AQ14964 217 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 ODF1Q14990 250 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 TMEM249Q2WGJ8 235 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 TMEM53Q6P2H8 277 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 ZNF730Q6ZMV8 503 aa6.6□□□□□ -1.35
SNHG1-223ENST00000545440 TMPRSS11FQ6ZWK6 438 aa6.6□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms