RNA–Protein interactions for RNA: ENST00000545015.1

POLE-222, Transcript of DNA polymerase epsilon, catalytic subunit, human

TSL 2

Gene POLE, Length 366 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
POLE-222	ENST00000545015	C1orf159	Q96HA4	380 aa		11.48	□□□□□ -0.57
POLE-222	ENST00000545015	SNX18	Q96RF0	628 aa		11.48	□□□□□ -0.57
POLE-222	ENST00000545015	ZNF416	Q9BWM5	594 aa		11.48	□□□□□ -0.57
POLE-222	ENST00000545015	YAE1D1	Q9NRH1	226 aa		11.48	□□□□□ -0.57
POLE-222	ENST00000545015	FAM53C	Q9NYF3	392 aa		11.48	□□□□□ -0.57
POLE-222	ENST00000545015	RTTN	Q86VV8	2226 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015		H7C1C5	153 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	LILRA1	O75019	489 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	KHDRBS3	O75525	346 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	KRT36	O76013	467 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	SCG5	P05408	212 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	T-ENOL	P0DO92	83 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	CTLA4	P16410	223 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	CALB2	P22676	271 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	TUBG1	P23258	451 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	IFNGR2	P38484	337 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	WNT5A	P41221	380 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	ALDH3B1	P43353	468 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	GDI2	P50395	445 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	RPS6KA3	P51812	740 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	LSM6	P62312	80 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	LCN6	P62502	163 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	MXRA7	P84157	204 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	SPIB	Q01892	262 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	GGTLC2	Q14390	218 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	KCNMB1	Q16558	191 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	RFX4	Q33E94	735 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	MBNL2	Q5VZF2	373 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	LCN8	Q6JVE9	175 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	ZDHHC21	Q8IVQ6	265 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	ZNF101	Q8IZC7	436 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	CCDC197	Q8NCU1	140 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	AKR7L	Q8NHP1	331 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	RDH5	Q92781	318 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	MARS2	Q96GW9	593 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	C1orf21	Q9H246	121 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	SYT4	Q9H2B2	425 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	TPK1	Q9H3S4	243 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	CHODL	Q9H9P2	273 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	TUBG2	Q9NRH3	451 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	EIF3K	Q9UBQ5	218 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	ATPIF1	Q9UII2	106 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	DUSP13	Q9UII6	198 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	NDRG4	Q9ULP0	352 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015	IER3IP1	Q9Y5U9	82 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015		V9GYQ6	96 aa		11.47	□□□□□ -0.57
POLE-222	ENST00000545015	YLPM1	P49750	1951 aa	Known RBP	11.47	□□□□□ -0.57
POLE-222	ENST00000545015		A0A1W2PPL8	197 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015		A0A1W2PPW3	197 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	TCRBV5S2	A0A599	114 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	C5orf49	A4QMS7	147 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	C17orf100	A8MU93	164 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015		B2RBV5	119 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	IDH3B	O43837	385 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	CLPTM1	O96005	669 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	HPX	P02790	462 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	LCK	P06239	509 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	ADH4	P08319	380 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	ACHE	P22303	614 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	RRM2	P31350	389 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	CDKN2A	P42771	156 aa	Known RBP	11.46	□□□□□ -0.57
POLE-222	ENST00000545015	TMEM33	P57088	247 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	ERVS71-1	P61550	626 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	SCRN3	Q0VDG4	424 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	TSPAN31	Q12999	210 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	MAD2L1BP	Q15013	274 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-222	ENST00000545015	PCGF3	Q3KNV8	242 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	PGM2L1	Q6PCE3	622 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	UGT2A3	Q6UWM9	527 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	PTCHD4	Q6ZW05	846 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	GLB1L2	Q8IW92	636 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	LINC00471	Q8N535	108 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	OR1J1	Q8NGS3	322 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	RASD2	Q96D21	266 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	TRIM15	Q9C019	465 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	OR52D1	Q9H346	318 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	MAGIX	Q9H6Y5	334 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	HINT3	Q9NQE9	182 aa	Known RBP	11.46	□□□□□ -0.57
POLE-222	ENST00000545015	TAAR3P	Q9P1P4	343 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	CGGBP1	Q9UFW8	167 aa	Predicted RBP	11.46	□□□□□ -0.57
POLE-222	ENST00000545015	CDC42EP3	Q9UKI2	254 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	FZR1	Q9UM11	496 aa		11.46	□□□□□ -0.57
POLE-222	ENST00000545015	PRPF19	Q9UMS4	504 aa	Known RBP	11.46	□□□□□ -0.57
POLE-222	ENST00000545015	OR10H3	O60404	316 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	SLC16A7	O60669	478 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	ATP6V1B2	P21281	511 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	CRABP1	P29762	137 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	SLC6A6	P31641	620 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	MMP15	P51511	669 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	CHN2	P52757	468 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	AQP6	Q13520	282 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	TRIM25	Q14258	630 aa	Known RBP	11.45	□□□□□ -0.58
POLE-222	ENST00000545015	CARTPT	Q16568	116 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	NKPD1	Q17RQ9	610 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	ZNF718	Q3SXZ3	478 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	FAM209A	Q5JX71	171 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	ZNF774	Q6NX45	483 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	PGBD2	Q6P3X8	592 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	ARL9	Q6T311	187 aa		11.45	□□□□□ -0.58
POLE-222	ENST00000545015	FANK1	Q8TC84	345 aa		11.45	□□□□□ -0.58

Retrieved 100 of 20,778 RNA–protein pairs in 48.7 ms