RNA–Protein interactions for RNA: ENST00000544989.1

HDAC4-216, Transcript of histone deacetylase 4, humanhuman

TSL 5

Gene HDAC4, Length 342 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC4-216ENST00000544989 LCKP06239 509 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 ADRA2AP08913 450 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF250P15622 560 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF26P17031 533 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 APEX1P27695 318 aaKnown RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 NOS3P29474 1203 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 ARHGDIAP52565 204 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 LSM6P62312 80 aaKnown RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 MRPS11P82912 194 aaKnown RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 TRAP1Q12931 704 aaKnown RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 TSPAN31Q12999 210 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 PCGF3Q3KNV8 242 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 FAM209AQ5JX71 171 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 C1orf94Q6P1W5 598 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 OR52L1Q8NGH7 329 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 SYNPRQ8TBG9 265 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 IPCEF1Q8WWN9 437 aaPredicted RBP10.16□□□□□ -0.78
HDAC4-216ENST00000544989 HTRA1Q92743 480 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 OR52D1Q9H346 318 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 ATPIF1Q9UII2 106 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 DUSP13Q9UII6 198 aa10.16□□□□□ -0.78
HDAC4-216ENST00000544989 IGLV3-9A0A075B6K5 115 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 C5orf49A4QMS7 147 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 H7C1C5 153 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 SLC16A7O60669 478 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ICMTO60725 284 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 CCNB2O95067 398 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 T-ENOLP0DO92 83 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 RAP2AP10114 183 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 DAOP14920 347 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 GSTM3P21266 225 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ATP6V1B2P21281 511 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 GIFP27352 417 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 GCH1P30793 250 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 LIPAP38571 399 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 NR4A2P43354 598 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 GSSP48637 474 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 LCN6P62502 163 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 PSG4Q00888 419 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 AQP6Q13520 282 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 NKPD1Q17RQ9 610 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF718Q3SXZ3 478 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 UGT2A3Q6UWM9 527 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 THSD4Q6ZMP0 1018 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 RINLQ6ZS11 566 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF786Q8N393 782 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 CLDN22Q8N7P3 220 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 CPEB3Q8NE35 698 aaKnown RBP10.15□□□□□ -0.78
HDAC4-216ENST00000544989 UBASH3BQ8TF42 649 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 RASD2Q96D21 266 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 POM121L2Q96KW2 1035 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 COG8Q96MW5 612 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ERMAPQ96PL5 475 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-216ENST00000544989 SYT3Q9BQG1 590 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 IFT27Q9BW83 186 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 ZNF416Q9BWM5 594 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 SYT4Q9H2B2 425 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 REEP1Q9H902 201 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 TAS2R1Q9NYW7 299 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 CGGBP1Q9UFW8 167 aaPredicted RBP10.15□□□□□ -0.78
HDAC4-216ENST00000544989 LYVE1Q9Y5Y7 322 aa10.15□□□□□ -0.78
HDAC4-216ENST00000544989 A0A096LNT2 108 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 TCRBV5S2A0A599 114 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 AQP12BA6NM10 295 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 VWC2LB2RUY7 222 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 J3QW42 95 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 SOCS2O14508 198 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 GYG2O15488 501 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 SGCEO43556 437 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 FAM157BP0CG42 384 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CCL2P13500 99 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CTLA4P16410 223 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CCNOP22674 350 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 GZMKP49863 264 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 FXYD6P3P58550 94 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 GLO1Q04760 184 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 ENDOGQ14249 297 aaKnown RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 KCNMB1Q16558 191 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CARTPTQ16568 116 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 TMEM249Q2WGJ8 235 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 SLC36A3Q495N2 470 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 ZMAT1Q5H9K5 638 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 MBNL2Q5VZF2 373 aaKnown RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CYB5R2Q6BCY4 276 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 OR2T5Q6IEZ7 315 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 PGBD2Q6P3X8 592 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 TMEM154Q6P9G4 183 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 ZNF620Q6ZNG0 422 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 Q71RC1 249 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 AQP12AQ8IXF9 295 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 PAQR4Q8N4S7 273 aaPredicted RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 NPEPL1Q8NDH3 523 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 OR1J1Q8NGS3 322 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 OR2T29Q8NH02 315 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 AKR7LQ8NHP1 331 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 CCDC124Q96CT7 223 aaKnown RBP10.14□□□□□ -0.79
HDAC4-216ENST00000544989 GPA33Q99795 319 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 RACGAP1Q9H0H5 632 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 WNT5BQ9H1J7 359 aa10.14□□□□□ -0.79
HDAC4-216ENST00000544989 YY1AP1Q9H869 796 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms