RNA–Protein interactions for RNA: ENST00000544652.1

DDX11-227, Transcript of DEAD/H-box helicase 11, humanhuman

TSL 5

Gene DDX11, Length 400 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX11-227ENST00000544652 DNAJC27Q9NZQ0 273 aa11.43□□□□□ -0.58
DDX11-227ENST00000544652 AASSQ9UDR5 926 aa11.43□□□□□ -0.58
DDX11-227ENST00000544652 WARS2Q9UGM6 360 aaKnown RBP11.43□□□□□ -0.58
DDX11-227ENST00000544652 KCNG2Q9UJ96 466 aa11.43□□□□□ -0.58
DDX11-227ENST00000544652 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP11.43□□□□□ -0.58
DDX11-227ENST00000544652 COMMD3-BMI1R4GMX3 469 aa11.43□□□□□ -0.58
DDX11-227ENST00000544652 SH3D21A4FU49 640 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 DENRO43583 198 aaKnown RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 UBL3O95164 117 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 CLDN1O95832 211 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 THBDP07204 575 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 HIST1H3AP68431 136 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 CDK5R2Q13319 367 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 AQP6Q13520 282 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 TAB1Q15750 504 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 MEP1BQ16820 701 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 SLC36A2Q495M3 483 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 HIST2H3PS2Q5TEC6 136 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 LCN1P1Q5VSP4 162 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 LAIR2Q6ISS4 152 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 HIST2H3AQ71DI3 136 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 SLC16A14Q7RTX9 510 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 THAP5Q7Z6K1 395 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 DMRTC2Q8IXT2 367 aaPredicted RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 LRRC18Q8N456 261 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 FAM169BQ8N8A8 192 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 FGFBP3Q8TAT2 258 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 NANOS1Q8WY41 292 aaKnown RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 ZMYND19Q96E35 227 aaPredicted RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 WFIKKN1Q96NZ8 548 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 WDR76Q9H967 626 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 EMC7Q9NPA0 242 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 CLN6Q9NWW5 311 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 CRNNQ9UBG3 495 aaPredicted RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 CYB5R1Q9UHQ9 305 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 LHFPL6Q9Y693 200 aa11.42□□□□□ -0.58
DDX11-227ENST00000544652 RAI1Q7Z5J4 1906 aaPredicted RBP11.42□□□□□ -0.58
DDX11-227ENST00000544652 TVP23AA6NH52 213 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 SNTNA6NMZ2 147 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 C12orf71A8MTZ7 269 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 WNT11O96014 354 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 IGKV3-15P01624 115 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 HLA-HP01893 362 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 HLA-DQA2P01906 255 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 PSKH1P11801 424 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 ZNF823P16415 610 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 HOXC12P31275 282 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 ENTPD1P49961 510 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 UBE2NP61088 152 aaKnown RBP11.41□□□□□ -0.58
DDX11-227ENST00000544652 RPS7P62081 194 aaKnown RBP11.41□□□□□ -0.58
DDX11-227ENST00000544652 ADAM8P78325 824 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 PPA1Q15181 289 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 C3orf36Q3SXR2 165 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 B3GLCTQ6Y288 498 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 OR52N5Q8NH56 324 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 CNIH3Q8TBE1 160 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 MUCL1Q96DR8 90 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 DACH2Q96NX9 599 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 INTS14Q96SY0 518 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 KCNN2Q9H2S1 579 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 ADGRL4Q9HBW9 690 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 NOX3Q9HBY0 568 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 MOV10Q9HCE1 1003 aaKnown RBP11.41□□□□□ -0.58
DDX11-227ENST00000544652 MRPS18AQ9NVS2 196 aaKnown RBP11.41□□□□□ -0.58
DDX11-227ENST00000544652 NDRG3Q9UGV2 375 aa11.41□□□□□ -0.58
DDX11-227ENST00000544652 SPTBN1Q01082 2364 aaKnown RBP11.41□□□□□ -0.58
DDX11-227ENST00000544652 A0A1W2PR80 420 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 TUBAL3A6NHL2 446 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 PRSS44E7EML9 344 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 ZNF593O00488 134 aaPredicted RBP11.4□□□□□ -0.58
DDX11-227ENST00000544652 IGLV1-44P01699 117 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 SBK2P0C263 348 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 PATE4P0C8F1 98 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 DBTP11182 482 aaKnown RBP11.4□□□□□ -0.58
DDX11-227ENST00000544652 CBR1P16152 277 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 ZNF32P17041 273 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 ARR3P36575 388 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 SLC15A1P46059 708 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 MTNR1AP48039 350 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 CXCR4P61073 352 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 PCBD1P61457 104 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 RAB1AP62820 205 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 TUBA1BP68363 451 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 TUBA4AP68366 448 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 POU4F2Q12837 409 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 SMN1Q16637 294 aaKnown RBP11.4□□□□□ -0.58
DDX11-227ENST00000544652 GSG1Q2KHT4 349 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 OTPQ5XKR4 325 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 SLC18B1Q6NT16 456 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 TUBA1AQ71U36 451 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 SLC16A9Q7RTY1 509 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 OR10H5Q8NGA6 315 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 LINC01560Q8TB33 94 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 PSMG3-AS1Q96PY0 264 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 YIPF3Q9GZM5 350 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 PLCXD1Q9NUJ7 323 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 ASH2LQ9UBL3 628 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 EXOGQ9Y2C4 368 aaKnown RBP11.4□□□□□ -0.58
DDX11-227ENST00000544652 LRRC42Q9Y546 428 aa11.4□□□□□ -0.58
DDX11-227ENST00000544652 J3QRE1 110 aa11.39□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 57.1 ms