RNA–Protein interactions for RNA: ENST00000544552.5

PAAF1-214, Transcript of proteasomal ATPase associated factor 1, humanhuman

TSL 1 (best) BASIC

Gene PAAF1, Length 1,612 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAAF1-214ENST00000544552 COMMD3Q9UBI1 195 aa11.33□□□□□ -0.6
PAAF1-214ENST00000544552 NCKAP5O14513 1909 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 TRABD2BA6NFA1 517 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 KLRC4-KLRK1H3BQV0 150 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 PDCD5O14737 125 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 SMAD9O15198 467 aaKnown RBP11.32□□□□□ -0.6
PAAF1-214ENST00000544552 NME2P1O60361 137 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 SRSF10O75494 262 aaKnown RBP11.32□□□□□ -0.6
PAAF1-214ENST00000544552 F10P00742 488 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 QDPRP09417 244 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 NME2P22392 152 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 KIR3DL2P43630 455 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 MFAP5Q13361 173 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 CAMK2BQ13554 666 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 RTP5Q14D33 572 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ZNF79Q15937 498 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 WDR38Q5JTN6 314 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 C10orf128Q5T292 105 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 PDSS1Q5T2R2 415 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 IDNKQ5T6J7 187 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 STEAP3Q658P3 488 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 LINC00696Q6ZRV3 163 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ZSCAN2Q7Z7L9 614 aaPredicted RBP11.32□□□□□ -0.6
PAAF1-214ENST00000544552 SNX29P2Q8IUI4 249 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 TMEM123Q8N131 208 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ZNF676Q8N7Q3 588 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ZIC4Q8N9L1 334 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 OR2V1Q8NHB1 315 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 PNPLA2Q96AD5 504 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 OR2M2Q96R28 347 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 UCN2Q96RP3 112 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP11.32□□□□□ -0.6
PAAF1-214ENST00000544552 C1orf198Q9H425 327 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 TIGARQ9NQ88 270 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ABCB10Q9NRK6 738 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 ABRACLQ9P1F3 81 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 DAPK2Q9UIK4 370 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 LRP12Q9Y561 859 aa11.32□□□□□ -0.6
PAAF1-214ENST00000544552 TRBV5-7A0A0A0MS05 114 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ARGFXA6NJG6 315 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 EIF1AYO14602 144 aaKnown RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 GLSO94925 669 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 PNPP00491 289 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 EPXP11678 715 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 POU3F2P20265 443 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CSNK1A1P48729 337 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 MMP16P51512 607 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OR10A3P58181 314 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 RIN1Q13671 783 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 TRIM16LQ309B1 348 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OTPQ5XKR4 325 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 FOXL2NBQ6ZUU3 175 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 LRRC28Q86X40 367 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CATSPERDQ86XM0 798 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 IL17RDQ8NFM7 739 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CPNE4Q96A23 557 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ZNF385AQ96PM9 386 aaKnown RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 TTTY12Q9BZ98 90 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 FAIMQ9NVQ4 179 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 TBCCD1Q9NVR7 557 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 PLA2G3Q9NZ20 509 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 RCE1Q9Y256 329 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 R4GMQ9 66 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CNOT1A5YKK6 2376 aaKnown RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 KIAA1549Q9HCM3 1950 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 A0A1B0GTH9 108 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 A0A1W2PPK0 400 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 HPGDSO60760 199 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ISG15P05161 165 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OCM2P0CE71 109 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OCMP0CE72 109 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CD46P15529 392 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 STARP49675 285 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 PSMD7P51665 324 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CLDN15P56746 228 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 LSM6P62312 80 aaKnown RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ATP1A1-AS1Q5TC04 95 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CARD17Q5XLA6 110 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ABLIM2Q6H8Q1 611 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OR7E24Q6IFN5 339 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 FAM131AQ6UXB0 335 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ZFP62Q8NB50 900 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OR6N1Q8NGY5 312 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 OR10D3Q8NH80 312 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CMTM3Q96MX0 182 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 MRI1Q9BV20 369 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 SCNM1Q9BWG6 230 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 SLITRK2Q9H156 845 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 ZNF552Q9H707 407 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 PPP1R3EQ9H7J1 279 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 NIPAL2Q9H841 368 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 SP140LQ9H930 580 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 POLE4Q9NR33 117 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 CYSLTR2Q9NS75 346 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 FOXD3Q9UJU5 478 aaPredicted RBP11.31□□□□□ -0.6
PAAF1-214ENST00000544552 KLK13Q9UKR3 277 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 WASF3Q9UPY6 502 aa11.31□□□□□ -0.6
PAAF1-214ENST00000544552 IGHV3-15A0A0B4J1V0 119 aa11.3□□□□□ -0.6
PAAF1-214ENST00000544552 A0A1W2PPL8 197 aa11.3□□□□□ -0.6
PAAF1-214ENST00000544552 ACOD1A6NK06 481 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 44.3 ms