RNA–Protein interactions for RNA: ENST00000543939.5

COPS7A-218, Transcript of COP9 signalosome subunit 7A, humanhuman

TSL 3

Gene COPS7A, Length 1,728 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS7A-218ENST00000543939 C10orf128Q5T292 105 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 SLC22A16Q86VW1 577 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 OR6N1Q8NGY5 312 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 INTS12Q96CB8 462 aaKnown RBP17.58■□□□□ 0.41
COPS7A-218ENST00000543939 ZNF845Q96IR2 970 aaPredicted RBP17.58■□□□□ 0.41
COPS7A-218ENST00000543939 WDFY2Q96P53 400 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 SEC61A2Q9H9S3 476 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 ACKR4Q9NPB9 350 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 FOXD3Q9UJU5 478 aaPredicted RBP17.58■□□□□ 0.41
COPS7A-218ENST00000543939 CMAHPQ9Y471 501 aa17.58■□□□□ 0.41
COPS7A-218ENST00000543939 TMEM212A6NML5 194 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF879B4DU55 563 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 RGS5O15539 181 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 CYTIPO60759 359 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF254O75437 659 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 ARL6IP5O75915 188 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 CDAP32320 146 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 SELENOPP49908 381 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 CCR9P51686 369 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 RASGEF1BQ0VAM2 473 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 WDR38Q5JTN6 314 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 OR7E24Q6IFN5 339 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 CORO6Q6QEF8 472 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 DEGS2Q6QHC5 323 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 FAM109AQ8N4B1 249 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 RNF133Q8WVZ7 376 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 PNPLA2Q96AD5 504 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 ATF6BQ99941 703 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 EMC7Q9NPA0 242 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 RCE1Q9Y256 329 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 CSAG2Q9Y5P2 127 aa17.58■□□□□ 0.4
COPS7A-218ENST00000543939 TRBV5-5A0A0J9YX44 114 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 A0A1W2PPK0 400 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 EFSO43281 561 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 SRSF10O75494 262 aaKnown RBP17.57■□□□□ 0.4
COPS7A-218ENST00000543939 CEACAM4O75871 244 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 PNPP00491 289 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 CFL1P23528 166 aaKnown RBP17.57■□□□□ 0.4
COPS7A-218ENST00000543939 LAX1Q8IWV1 398 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 C20orf196Q8IYI0 205 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 PARP16Q8N5Y8 322 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 CEP19Q96LK0 163 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 MIXL1Q9H2W2 232 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 OCEL1Q9H607 264 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 POLE4Q9NR33 117 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 LHFPL6Q9Y693 200 aa17.57■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF407Q9C0G0 2248 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 A0A0G2JK05 382 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 PIN1P1O15428 100 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 ITGB2P05107 769 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 SLC10A1Q14973 349 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 BCL2A1Q16548 175 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 RSPO4Q2I0M5 234 aaPredicted RBP17.56■□□□□ 0.4
COPS7A-218ENST00000543939 FOXL2NBQ6ZUU3 175 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 FCRLAQ7L513 359 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 ABTB1Q969K4 478 aaPredicted RBP17.56■□□□□ 0.4
COPS7A-218ENST00000543939 DERL3Q96Q80 235 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 SLC30A2Q9BRI3 323 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 COMMD4Q9H0A8 199 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 C1orf198Q9H425 327 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 ABCB9Q9NP78 766 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 NOX4Q9NPH5 578 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 KLK13Q9UKR3 277 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 KCNMB2Q9Y691 235 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 DNAJC13O75165 2243 aa17.56■□□□□ 0.4
COPS7A-218ENST00000543939 DCDC2BA2VCK2 349 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 NTF4P34130 210 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 MFGE8Q08431 387 aaPredicted RBP17.55■□□□□ 0.4
COPS7A-218ENST00000543939 Q499Y3 187 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 HSD17B12Q53GQ0 312 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 RNFT1Q5M7Z0 435 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 SPANXN2Q5MJ10 180 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 CATSPERDQ86XM0 798 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 MEIOBQ8N635 442 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF676Q8N7Q3 588 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 IL17RDQ8NFM7 739 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 OR10S1Q8NGN2 331 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF775Q96BV0 537 aaPredicted RBP17.55■□□□□ 0.4
COPS7A-218ENST00000543939 SLAMF6Q96DU3 332 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 GDF2Q9UK05 429 aaPredicted RBP17.55■□□□□ 0.4
COPS7A-218ENST00000543939 R4GMQ9 66 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 ACOD1A6NK06 481 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 ACOT7O00154 380 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 DHHO43323 396 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 MAGEB1P43366 347 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 OR10A3P58181 314 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 SRYQ05066 204 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 DDI2Q5TDH0 399 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 FBXL3Q9UKT7 428 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 LIPGQ9Y5X9 500 aa17.55■□□□□ 0.4
COPS7A-218ENST00000543939 NCOA6Q14686 2063 aaPredicted RBP17.54■□□□□ 0.4
COPS7A-218ENST00000543939 GPR171O14626 319 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 ACTL6AO96019 429 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 RAB3BP20337 219 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 IFITM3Q01628 133 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 CEP78Q5JTW2 689 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 ZNF544Q6NX49 715 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 CFAP77Q6ZQR2 320 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 RDH10Q8IZV5 341 aa17.54■□□□□ 0.4
COPS7A-218ENST00000543939 OR2AJ1Q8NGZ0 328 aa17.54■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.1 ms