RNA–Protein interactions for RNA: ENST00000543233.2

CDH4-201, Transcript of cadherin 4, humanhuman

TSL 2 BASIC

Gene CDH4, Length 3,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH4-201ENST00000543233 CXorf40BQ96DE9 158 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 TTTY10Q9BZA0 68 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 RAB33BQ9H082 229 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 TCEAL2Q9H3H9 227 aaPredicted RBP10.25□□□□□ -0.77
CDH4-201ENST00000543233 SYNPO2LQ9H987 977 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 CALML5Q9NZT1 146 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 CACFD1Q9UGQ2 172 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 ATG4BQ9Y4P1 393 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 SEC16AO15027 2179 aa10.25□□□□□ -0.77
CDH4-201ENST00000543233 LOC105378220A0A1B0GUY1 285 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 MEIS3P1A6NDR6 274 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ZNF860A6NHJ4 632 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 HMGN4O00479 90 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 EML2O95834 649 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SERPINA5P05154 406 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TFF2Q03403 129 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 C11orf87Q6NUJ2 197 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ADAMTSL4Q6UY14 1074 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ZNF620Q6ZNG0 422 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 C10orf53Q8N6V4 93 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR2A1Q8NGT9 310 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR8S1Q8NH09 359 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR10G6Q8NH81 332 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TERB2Q8NHR7 220 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 NUDCD2Q8WVJ2 157 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TSACCQ96A04 125 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 WDR92Q96MX6 357 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 MTIF3Q9H2K0 278 aaKnown RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 GLIPR2Q9H4G4 154 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 EGLN3Q9H6Z9 239 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TNFSF18Q9UNG2 199 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 NPFFR2Q9Y5X5 522 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SIRT4Q9Y6E7 314 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 ALPK3Q96L96 1907 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ARHGEF17Q96PE2 2063 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 EPOPA6NHQ4 379 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CRYABP02511 175 aaKnown RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 GUSBP08236 651 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CD1CP29017 333 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 GIPRP48546 466 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CAV2P51636 162 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ATP1B3P54709 279 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CLDN12P56749 244 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SNRPNP63162 240 aaKnown RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 INSM1Q01101 510 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 DUSP2Q05923 314 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PCGF3Q3KNV8 242 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TMEM69Q5SWH9 247 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ATPAF1Q5TC12 328 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR4C11Q6IEV9 310 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 BAP18Q8IXM2 172 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 KLHDC8AQ8IYD2 350 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 HIST3H2BBQ8N257 126 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ZNF615Q8N8J6 731 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 BEND2Q8NDZ0 799 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OIT3Q8WWZ8 545 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR5P2Q8WZ92 322 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SLC35G5Q96KT7 338 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 VPS25Q9BRG1 176 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 AICDAQ9GZX7 198 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TMEM38AQ9H6F2 299 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 FGF22Q9HCT0 170 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 FGF20Q9NP95 211 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 SIRT3Q9NTG7 399 aaPredicted RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 A4GNTQ9UNA3 340 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 KCNE3Q9Y6H6 103 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PRAMEF27A3QJZ7 478 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 RNF222A6NCQ9 220 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 NUDT19A8MXV4 375 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 IDSB3KWA1 339 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 HSBP1L1C9JCN9 74 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PNPP00491 289 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 H1F0P07305 194 aaKnown RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 NTSP30990 170 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 THBS4P35443 961 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR3A1P47881 315 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ID4P47928 161 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 RAB28P51157 221 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PPP2CBP62714 309 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PPP2CAP67775 309 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SHHQ15465 462 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 TCTN3Q6NUS6 607 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ENPP7Q6UWV6 458 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SSX7Q7RTT5 188 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PRICKLE2Q7Z3G6 844 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 RAB42Q8N4Z0 105 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 OR10A7Q8NGE5 316 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PPP1R1CQ8WVI7 109 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SMPDL3BQ92485 455 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 ZG16BQ96DA0 208 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 DIRC2Q96SL1 478 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 HDAC8Q9BY41 377 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 SLC17A9Q9BYT1 436 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CHST6Q9GZX3 395 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PARP12Q9H0J9 701 aaKnown RBP10.24□□□□□ -0.77
CDH4-201ENST00000543233 GAL3ST2Q9H3Q3 398 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 PRODH2Q9UF12 536 aa10.24□□□□□ -0.77
CDH4-201ENST00000543233 CDRT15L2A8MXV6 281 aa10.23□□□□□ -0.77
CDH4-201ENST00000543233 GABARAPH6UMI1 98 aa10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 64.9 ms