RNA–Protein interactions for RNA: ENST00000542813.2

SFSWAP-211, Transcript of splicing factor SWAP, humanhuman

TSL 3

Gene SFSWAP, Length 373 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFSWAP-211ENST00000542813 FCN3O75636 299 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZFAND5O76080 213 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CCNB2O95067 398 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SCELO95171 688 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NTN1O95631 604 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CRYZL1O95825 349 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 IGLV2-11P01706 119 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SNHG28P0DPA3 235 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 HSPD1P10809 573 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 TCP1P17987 556 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NPR2P20594 1047 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 OXTRP30559 389 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 GPR4P46093 362 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 RPL29P47914 159 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 GSSP48637 474 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 IST1P53990 364 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PSMD4P55036 377 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 YWHAEP62258 255 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 S100A12P80511 92 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 MRPS15P82914 257 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 RPL36AP83881 106 aaKnown RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CHRNB3Q05901 458 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC10A7Q0GE19 358 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZFP69Q49AA0 526 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 KLHL22Q53GT1 634 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 GPRC6AQ5T6X5 926 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF658Q5TYW1 1059 aaPredicted RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 METTL11BQ5VVY1 283 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 STUMQ69YW2 141 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CGB2Q6NT52 195 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 UFSP1Q6NVU6 142 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ULK3Q6PHR2 472 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 REG3GQ6UW15 175 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CERS6Q6ZMG9 384 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 FRA10AC1Q70Z53 315 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 GPR65Q8IYL9 337 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CMTM8Q8IZV2 173 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 JAGN1Q8N5M9 183 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 FAM86B1Q8N7N1 296 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 TTC29Q8NA56 475 aaPredicted RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 LRRC75AQ8NAA5 344 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF248Q8NDW4 579 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 FBXL13Q8NEE6 735 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 OR51L1Q8NGJ5 315 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 OR52E5Q8NH55 327 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NDNFQ8TB73 568 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PYROXD1Q8WU10 500 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NAT14Q8WUY8 206 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PIH1D2Q8WWB5 315 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CAPSLQ8WWF8 208 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NELFBQ8WX92 580 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ZBED3Q96IU2 234 aaPredicted RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 NODALQ96S42 347 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CTRCQ99895 268 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 ATF6BQ99941 703 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM175Q9BSA9 504 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 FAIM2Q9BWQ8 316 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CHIAQ9BZP6 476 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 MFFQ9GZY8 342 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PSTPIP2Q9H939 334 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 FGF20Q9NP95 211 aaPredicted RBP3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 TREM1Q9NP99 234 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 C12orf4Q9NQ89 552 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 C8orf4Q9NR00 106 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 RWDD2AQ9UIY3 292 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 STAP1Q9ULZ2 295 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PLLPQ9Y342 182 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 AKAP11Q9UKA4 1901 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 PRUNE2Q8WUY3 3088 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 MYH10P35580 1976 aa3.14□□□□□ -1.91
SFSWAP-211ENST00000542813 CACNA1SQ13698 1873 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TRAV6A0A075B6T7 132 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 IGHV3-16A0A0C4DH30 117 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 A0A1B0GTH9 108 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 A0A1W2PQ67 120 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 A0A1W2PRD5 423 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 TMEM120BA0PK00 339 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 MEX3AA1L020 520 aaKnown RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 RPL37AP8A6NKH3 93 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ZNF99A8MXY4 864 aaPredicted RBP3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 DCTN6O00399 190 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 PFDN6O15212 129 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ZW10O43264 779 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 NOL4O94818 638 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 KLHL2O95198 593 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 OR5F1O95221 314 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 SLC2A10O95528 541 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 LALBAP00709 142 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 IFNW1P05000 195 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 FGF1P05230 155 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 IGKV5-2P06315 115 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 C2P06681 752 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CALM1P0DP23 149 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CALM2P0DP24 149 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CALM3P0DP25 149 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 UGT1A4P22310 534 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 ADORA2BP29275 332 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 CRABP2P29373 138 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 FOXN2P32314 431 aa3.13□□□□□ -1.91
SFSWAP-211ENST00000542813 EVI2BP34910 448 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 38.9 ms