RNA–Protein interactions for RNA: ENST00000542786.1

LDB3-207, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 1,889 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-207ENST00000542786 PSMF1Q92530 271 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 THRSPQ92748 146 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 UPRTQ96BW1 309 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 SLC25A44Q96H78 314 aaPredicted RBP12.61□□□□□ -0.39
LDB3-207ENST00000542786 SGCZQ96LD1 299 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 MARVELD1Q9BSK0 173 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 MRI1Q9BV20 369 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 LIN7BQ9HAP6 207 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 HPF1Q9NWY4 346 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 CLEC4AQ9UMR7 237 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 FARSAQ9Y285 508 aaKnown RBP12.61□□□□□ -0.39
LDB3-207ENST00000542786 SERPINA7P05543 415 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 LAP3P28838 519 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 SLC6A1P30531 599 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 MFAP5Q13361 173 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ODF4Q2M2E3 257 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 CCDC157Q569K6 752 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 B3GNTL1Q67FW5 361 aaPredicted RBP12.61□□□□□ -0.39
LDB3-207ENST00000542786 FAM166AQ6J272 317 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 FCRLAQ7L513 359 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 TMEM156Q8N614 296 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 OR1J4Q8NGS1 313 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 SMIM4Q8WVI0 70 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ST6GAL2Q96JF0 529 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 HDHD2Q9H0R4 259 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 SLITRK2Q9H156 845 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 ETV7Q9Y603 341 aa12.61□□□□□ -0.39
LDB3-207ENST00000542786 MED12Q93074 2177 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 CACNA1CQ13936 2221 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 HMX3A6NHT5 357 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 LRRC3CA6NJW4 275 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 H0YC42 278 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 SULT2B1O00204 365 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 IGHG1P01857 330 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 ISG15P05161 165 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 ICAM2P13598 275 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 IGFBP3P17936 291 aaPredicted RBP12.6□□□□□ -0.39
LDB3-207ENST00000542786 FSTP19883 344 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 MNDAP41218 407 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 PTH2RP49190 550 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 RPS15P62841 145 aaKnown RBP12.6□□□□□ -0.39
LDB3-207ENST00000542786 CAMK2DQ13557 499 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 KCNMB1Q16558 191 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 ZNF57Q68EA5 555 aaPredicted RBP12.6□□□□□ -0.39
LDB3-207ENST00000542786 CORO6Q6QEF8 472 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 ASB5Q8WWX0 329 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 RBP7Q96R05 134 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 PLEKHA1Q9HB21 404 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 P4HTMQ9NXG6 502 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 NLKQ9UBE8 527 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 RABL2AQ9UBK7 228 aaPredicted RBP12.6□□□□□ -0.39
LDB3-207ENST00000542786 RABL2BQ9UNT1 228 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 FOXJ3Q9UPW0 622 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 EMC9Q9Y3B6 208 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 LHFPL6Q9Y693 200 aa12.6□□□□□ -0.39
LDB3-207ENST00000542786 LOC101059948A0A1B0GTJ6 334 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 H3BSH0 61 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 CD3GP09693 182 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 SCAND1P57086 179 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 PITPNAQ00169 270 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 PLA2G7Q13093 441 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 LRFN4Q6PJG9 635 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 HDDC2Q7Z4H3 204 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 TMPRSS12Q86WS5 348 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 IZUMO1Q8IYV9 350 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 FAM206AQ9NX38 181 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 CACNG2Q9Y698 323 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 FAM240BA0A1B0GVZ2 78 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 CBR3O75828 277 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 MT-CO3P00414 261 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ZNF806P0C7X5 589 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 JMJD7P0C870 316 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ACHEP22303 614 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 HLA-DMAP28067 261 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 DCTDP32321 178 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 MMP16P51512 607 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ZNF133P52736 654 aaPredicted RBP12.59□□□□□ -0.39
LDB3-207ENST00000542786 CLRN1P58418 232 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 KLF9Q13886 244 aaPredicted RBP12.59□□□□□ -0.39
LDB3-207ENST00000542786 POU4F3Q15319 338 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ACER2Q5QJU3 275 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 TMEM225Q6GV28 225 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 PLET1Q6UQ28 207 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 DNM1P46Q6ZS02 220 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ASB18Q6ZVZ8 466 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 ZBTB8BQ8NAP8 495 aaPredicted RBP12.59□□□□□ -0.39
LDB3-207ENST00000542786 TSEN15Q8WW01 171 aaKnown RBP12.59□□□□□ -0.39
LDB3-207ENST00000542786 SLC7A6Q92536 515 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 HAVCR1Q96D42 359 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 OR52A1Q9UKL2 312 aa12.59□□□□□ -0.39
LDB3-207ENST00000542786 DMDP11532 3685 aa12.58□□□□□ -0.39
LDB3-207ENST00000542786 CCDC187A0A096LP49 1063 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 RAD1O60671 282 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 CCNKO75909 580 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 MAS1P04201 325 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 DNASE1L1P49184 302 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 ATAD3CQ5T2N8 411 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 RAET1LQ5VY80 246 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 CFAP77Q6ZQR2 320 aa12.58□□□□□ -0.4
LDB3-207ENST00000542786 GPAT4Q86UL3 456 aa12.58□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 35.2 ms