RNA–Protein interactions for RNA: ENST00000542714.5

CHFR-221, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 4

Gene CHFR, Length 542 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-221ENST00000542714 CRLF2Q9HC73 371 aa11.69□□□□□ -0.54
CHFR-221ENST00000542714 B3GAT2Q9NPZ5 323 aa11.69□□□□□ -0.54
CHFR-221ENST00000542714 SLC7A10Q9NS82 523 aa11.69□□□□□ -0.54
CHFR-221ENST00000542714 AHRRA9YTQ3 701 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 AIREO43918 545 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 NOL3O60936 208 aaKnown RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 SULT1C4O75897 302 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 IGHV3-9P01782 118 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 MSR1P21757 451 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CAPZA2P47755 286 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 ZNF84P51523 738 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 GBX2P52951 348 aaPredicted RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 FOXG1P55316 489 aaPredicted RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 TAS2R43P59537 309 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 NANOS3P60323 173 aaKnown RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 VBP1P61758 197 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 NCS1P62166 190 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 MRPS34P82930 218 aaKnown RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 ROR2Q01974 943 aaKnown RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 CDK5R1Q15078 307 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 SGCAQ16586 387 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CEACAM16Q2WEN9 425 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 LIPNQ5VXI9 398 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 RTL6Q6ICC9 239 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 ZNF585AQ6P3V2 769 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CFAP77Q6ZQR2 320 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 SEM1Q6ZVN7 128 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 SPATC1Q76KD6 591 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 KCTD20Q7Z5Y7 419 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 EGFL6Q8IUX8 553 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 YIPF7Q8N8F6 280 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 NDNFQ8TB73 568 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 WNT2BQ93097 391 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 GMPPAQ96IJ6 420 aaPredicted RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 PGLYRP3Q96LB9 341 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 DCLRE1CQ96SD1 692 aaKnown RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 SLX1AQ9BQ83 275 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CHCHD6Q9BRQ6 235 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CENPOQ9BU64 300 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 ZNF416Q9BWM5 594 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 NELFAQ9H3P2 528 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 RNF167Q9H6Y7 350 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 ELOVL3Q9HB03 270 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 TMEM38BQ9NVV0 291 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 PARPBPQ9NWS1 579 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 GDF2Q9UK05 429 aaPredicted RBP11.68□□□□□ -0.54
CHFR-221ENST00000542714 IKZF2Q9UKS7 526 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 CACNA1CQ13936 2221 aa11.68□□□□□ -0.54
CHFR-221ENST00000542714 SVILO95425 2214 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 A0A1W2PPW3 197 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 CD8B2A6NJW9 211 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 RPL36A-HNRNPH2H7BZ11 118 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 PLPP2O43688 288 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 SRSF10O75494 262 aaKnown RBP11.67□□□□□ -0.54
CHFR-221ENST00000542714 RPP14O95059 124 aaKnown RBP11.67□□□□□ -0.54
CHFR-221ENST00000542714 KRT8P05787 483 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 GABRA5P31644 462 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 OR3A2P47893 321 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 TGM4P49221 684 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 LSM6P62312 80 aaKnown RBP11.67□□□□□ -0.54
CHFR-221ENST00000542714 HIST1H3AP68431 136 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 SIRPAP78324 504 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 GPR50Q13585 617 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 HIST2H3PS2Q5TEC6 136 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 NSUN5P2Q63ZY6 315 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 CD200R1LQ6Q8B3 271 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 ARL9Q6T311 187 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 HIST2H3AQ71DI3 136 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 FAM220AQ7Z4H9 259 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 ZNF679Q8IYX0 411 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 FAM57AQ8TBR7 257 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 RNF133Q8WVZ7 376 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 HSD17B8Q92506 261 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 TMEM203Q969S6 136 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 APH1AQ96BI3 265 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 SNRNP40Q96DI7 357 aaKnown RBP11.67□□□□□ -0.54
CHFR-221ENST00000542714 TM9SF2Q99805 663 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 C12orf49Q9H741 205 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 PNRC2Q9NPJ4 139 aaKnown RBP11.67□□□□□ -0.54
CHFR-221ENST00000542714 GLRX2Q9NS18 164 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 PRSS50Q9UI38 385 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 STUB1Q9UNE7 303 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 LRP12Q9Y561 859 aa11.67□□□□□ -0.54
CHFR-221ENST00000542714 LOC100506127A0A0U1RQW1 187 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 MBD3L4A6NDZ8 208 aaPredicted RBP11.66□□□□□ -0.54
CHFR-221ENST00000542714 MBD3L3A6NE82 208 aaPredicted RBP11.66□□□□□ -0.54
CHFR-221ENST00000542714 MBD3L5A6NJ08 208 aaPredicted RBP11.66□□□□□ -0.54
CHFR-221ENST00000542714 OR6C65A6NJZ3 312 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 HSPB2A8KAH6 182 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 DVL2O14641 736 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 TACSTD2P09758 323 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 OPRL1P41146 370 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 KIR3DL2P43630 455 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 GDI2P50395 445 aaKnown RBP11.66□□□□□ -0.54
CHFR-221ENST00000542714 FABP5Q01469 135 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 MFGE8Q08431 387 aaPredicted RBP11.66□□□□□ -0.54
CHFR-221ENST00000542714 NFATC3Q12968 1075 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 STK11Q15831 433 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 HSPB2Q16082 182 aa11.66□□□□□ -0.54
CHFR-221ENST00000542714 CCDC58Q4VC31 144 aa11.66□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms