RNA–Protein interactions for RNA: ENST00000542685.5

XRCC4-206, Transcript of X-ray repair cross complementing 4, humanhuman

TSL 1 (best)

Gene XRCC4, Length 1,243 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
XRCC4-206ENST00000542685 ADGRG7Q96K78 797 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 OMDQ99983 421 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 SYT17Q9BSW7 474 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 TKTL2Q9H0I9 626 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 OR2AG1Q9H205 316 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 LRRN3Q9H3W5 708 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 LHX9Q9NQ69 397 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 SPHK2Q9NRA0 654 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 UBQLN4Q9NRR5 601 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 GPR173Q9NS66 373 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 SLC6A13Q9NSD5 602 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 SIRT3Q9NTG7 399 aaPredicted RBP5.23□□□□□ -1.57
XRCC4-206ENST00000542685 MS4A12Q9NXJ0 267 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 ZNF226Q9NYT6 803 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 COMMD3Q9UBI1 195 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 TRPC4Q9UBN4 977 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 ICKQ9UPZ9 632 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 NEU3Q9UQ49 428 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 EXOSC1Q9Y3B2 195 aaKnown RBP5.23□□□□□ -1.57
XRCC4-206ENST00000542685 HES2Q9Y543 173 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 TIMM10BQ9Y5J6 103 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 MMP24Q9Y5R2 645 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 NYNRINQ9P2P1 1898 aaKnown RBP5.23□□□□□ -1.57
XRCC4-206ENST00000542685 PTPRDP23468 1912 aa5.23□□□□□ -1.57
XRCC4-206ENST00000542685 SCN8AQ9UQD0 1980 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ANHXE9PGG2 379 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 J3KRW8 73 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 BHLHE40O14503 412 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 NKX2-8O15522 239 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SYT7O43581 403 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 KLK8O60259 260 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SMPD2O60906 423 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 STK16O75716 305 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 GRAP2O75791 330 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 DFFBO76075 338 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TOXO94900 526 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 GLCEO94923 617 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 RAB36O95755 333 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SRPRAP08240 638 aaKnown RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 RD3LP0DJH9 198 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 IDSP22304 550 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 CPT2P23786 658 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ACKR3P25106 362 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 HSD11B1P28845 292 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 CCR1P32246 355 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR3A1P47881 315 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TNFSF10P50591 281 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 PNLIPRP2P54317 469 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ERVFC1-1P60608 527 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SELENOTP62341 195 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 MC1RQ01726 317 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 VEZF1Q14119 521 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 RAB30Q15771 203 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TMEM241Q24JQ0 296 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 MOGAT2Q3SYC2 334 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SLC36A2Q495M3 483 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 UNC50Q53HI1 259 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 CARD16Q5EG05 197 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR8G2PQ6IF36 304 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 FBXW12Q6X9E4 464 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SSX7Q7RTT5 188 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 MYPOPQ86VE0 399 aaPredicted RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TRAPPC5Q8IUR0 188 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 GPR65Q8IYL9 337 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 NRSN1Q8IZ57 195 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 NKAPQ8N5F7 415 aaKnown RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 FAM86B1Q8N7N1 296 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SAMD12Q8N8I0 201 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 POGLUT1Q8NBL1 392 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 HJURPQ8NCD3 748 aaPredicted RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ZNF248Q8NDW4 579 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ACVR1CQ8NER5 493 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR1J1Q8NGS3 322 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR52P1PQ8NH57 321 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR51A7Q8NH64 312 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 HPSE2Q8WWQ2 592 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 THRSPQ92748 146 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ADAD1Q96M93 576 aaKnown RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 PPM1MQ96MI6 270 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR5B2Q96R09 309 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 OR1F2PQ96R84 312 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SLC22A12Q96S37 553 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 INTS14Q96SY0 518 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 PRRT1Q99946 306 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TBL1YQ9BQ87 522 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 FAIM2Q9BWQ8 316 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 POTEKPQ9BYX7 375 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 TLNRD1Q9H1K6 362 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 MFSD1Q9H3U5 465 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ABHD16BQ9H3Z7 469 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SMDT1Q9H4I9 107 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 MAP6D1Q9H9H5 199 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 FBRSL1Q9HCM7 1045 aaKnown RBP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ACKR4Q9NPB9 350 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP5.22□□□□□ -1.57
XRCC4-206ENST00000542685 SPG21Q9NZD8 308 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 GNG8Q9UK08 70 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 RPH3ALQ9UNE2 315 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 ZFP30Q9Y2G7 519 aa5.22□□□□□ -1.57
XRCC4-206ENST00000542685 PRG3Q9Y2Y8 225 aaPredicted RBP5.22□□□□□ -1.57
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms