RNA–Protein interactions for RNA: ENST00000542136.1

TNFSF13B-206, Transcript of TNF superfamily member 13b, humanhuman

TSL 1 (best) BASIC

Gene TNFSF13B, Length 495 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-206ENST00000542136 HSF2Q03933 536 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 KHDRBS1Q07666 443 aaKnown RBP eCLIP11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 SCRN3Q0VDG4 424 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 SLC36A3Q495N2 470 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 PABPC1L2AQ5JQF8 200 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 CLEC12AQ5QGZ9 265 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 ZFP1Q6P2D0 407 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 FAHD1Q6P587 224 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 LEG1Q6P5S2 330 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 TGIF2LYQ8IUE0 185 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 PARP8Q8N3A8 854 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 CPEB3Q8NE35 698 aaKnown RBP11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 OR52E2Q8NGJ4 325 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 OR8D4Q8NGM9 314 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 OR2T4Q8NH00 348 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 OR5K1Q8NHB7 308 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 TEX47Q8TBZ9 253 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 IPCEF1Q8WWN9 437 aaPredicted RBP11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 POM121L2Q96KW2 1035 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 OR2H1Q9GZK4 316 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 TUBG2Q9NRH3 451 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 KCNG2Q9UJ96 466 aa11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 COA3Q9Y2R0 106 aaPredicted RBP11.9□□□□□ -0.5
TNFSF13B-206ENST00000542136 PRRC2AP48634 2157 aaKnown RBP11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 DCTN6O00399 190 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 IFNGP01579 166 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 OR4A8P0C604 315 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 FOSL1P15407 271 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 GRK5P34947 590 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 BLVRAP53004 296 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 SLC25A1P53007 311 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 HIST1H3AP68431 136 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 HIST2H3PS2Q5TEC6 136 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 SLC27A4Q6P1M0 643 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 ARL9Q6T311 187 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 HIST2H3AQ71DI3 136 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 ZDHHC13Q8IUH4 622 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 SVOPLQ8N434 492 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 SLC26A10Q8NG04 563 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 HTRA1Q92743 480 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 CENPNQ96H22 339 aaPredicted RBP11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 RBM4Q9BWF3 364 aaKnown RBP11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 NMNAT2Q9BZQ4 307 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 BCL2L14Q9BZR8 327 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 WNT5BQ9H1J7 359 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 PLK3Q9H4B4 646 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 CDH20Q9HBT6 801 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 SRA1Q9HD15 236 aaKnown RBP11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 CMC2Q9NRP2 79 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 NDRG4Q9ULP0 352 aaKnown RBP11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 CMAHPQ9Y471 501 aa11.89□□□□□ -0.51
TNFSF13B-206ENST00000542136 RIIAD1A6NNX1 92 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 G3V2T6 193 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 H3BN98 237 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 HMGN1P05114 100 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 SCG5P05408 212 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 GAAP10253 952 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 PRKACGP22612 351 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 APEX1P27695 318 aaKnown RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 THBS4P35443 961 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 GDI2P50395 445 aaKnown RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 UCP2P55851 309 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 ATP5J2P56134 94 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 CDK5Q00535 292 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 SNTB2Q13425 540 aaKnown RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 SLC35F1Q5T1Q4 408 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 KRTAP1-3Q8IUG1 177 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 ATG16L2Q8NAA4 619 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 GJC3Q8NFK1 279 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 TSSK2Q96PF2 358 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 RAB3IPQ96QF0 476 aaPredicted RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 DOK1Q99704 481 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 TEX12Q9BXU0 123 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 RPRD1BQ9NQG5 326 aaKnown RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 EIF3KQ9UBQ5 218 aaKnown RBP11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 ENOPH1Q9UHY7 261 aa11.88□□□□□ -0.51
TNFSF13B-206ENST00000542136 LOC100509620A0A075B734 347 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 TMEM129A0AVI4 362 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 H3BSA7 217 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 J3QW42 95 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 SGCEO43556 437 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 SOX14O95416 240 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 ZNF250P15622 560 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 ZNF3P17036 446 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 PPOXP50336 477 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 SNRPD2P62316 118 aaKnown RBP11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 ESRRGP62508 458 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 RAB35Q15286 201 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 UGT2A3Q6UWM9 527 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 SLC37A3Q8NCC5 494 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 SDR9C7Q8NEX9 313 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 OR4Q3Q8NH05 313 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 C11orf40Q8WZ69 217 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 MRPL24Q96A35 216 aaKnown RBP11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 TMUB1Q9BVT8 246 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 CACNG6Q9BXT2 260 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 GABARAPL1Q9H0R8 117 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 RERGLQ9H628 205 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 ELOVL3Q9HB03 270 aa11.87□□□□□ -0.51
TNFSF13B-206ENST00000542136 EMC7Q9NPA0 242 aa11.87□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms