RNA–Protein interactions for RNA: ENST00000542033.5

USP28-210, Transcript of ubiquitin specific peptidase 28, humanhuman

TSL 2

Gene USP28, Length 852 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP28-210ENST00000542033 SLITRK2Q9H156 845 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZDHHC4Q9NPG8 344 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ZNF302Q9NR11 478 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 RDH8Q9NYR8 311 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 OR52A1Q9UKL2 312 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 SLC6A5Q9Y345 797 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ITSN1Q15811 1721 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 ADCY10Q96PN6 1610 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 CD109Q6YHK3 1445 aa2.67□□□□□ -1.98
USP28-210ENST00000542033 MYOM1P52179 1685 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ARHGEF5Q12774 1597 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SPATA31D1Q6ZQQ2 1576 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ARHGEF10O15013 1369 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TMEM2Q9UHN6 1383 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MBLAC1A4D2B0 266 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 MGAT4DA6NG13 374 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 A8MU76 341 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TSTD3H0UI37 97 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 K7EP13 123 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 K7EQD1 137 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CLDN5O00501 218 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PRRG1O14668 218 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SCN2BO60939 215 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 DNAJB6O75190 326 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 WBP4O75554 376 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 UPK1BO75841 260 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PIAS1O75925 651 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR2B3O76000 313 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 VAPBO95292 243 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HPRP00739 348 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MELTFP08582 738 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 NBEAP1P0C6P0 100 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 UQCRFS1P1P0C7P4 283 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SCGB1A1P11684 91 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 IFI30P13284 250 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CCL2P13500 99 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 HLA-EP13747 358 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FOLR2P14207 255 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FOSL2P15408 326 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 LCN1P31025 176 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SPRP35270 261 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 MAS1LP35410 378 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RFC3P40938 356 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ETV6P41212 452 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SGSHP51688 502 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 AQP4P55087 323 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RGS8P57771 180 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 KRTAP10-12P60413 245 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CDC42P60953 191 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RAB2AP61019 212 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ERVK-16P61578 105 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PKIAP61925 76 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RPS4XP62701 263 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 RAP1AP62834 184 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 NAAAQ02083 359 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SRYQ05066 204 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RBBP4Q09028 425 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 AQP6Q13520 282 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ENPP2Q13822 863 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 EXOSC2Q13868 293 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 PSG3Q16557 428 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ZNF239Q16600 458 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 RFX4Q33E94 735 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MS4A18Q3C1V0 323 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 BSXQ3C1V8 233 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SNAI3Q3KNW1 292 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TEX44Q53QW1 395 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SFT2D3Q587I9 215 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C9orf135Q5VTT2 229 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ASPHD2Q6ICH7 369 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 RHBDD2Q6NTF9 364 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 STEAP1BQ6NZ63 245 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FAM151BQ6UXP7 276 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 SPNS3Q6ZMD2 512 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 GDPGP1Q6ZNW5 385 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ARCQ7LC44 396 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 CYP4Z1Q86W10 505 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 TGIF2LXQ8IUE1 241 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C10orf107Q8IVU9 208 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR4N5Q8IXE1 308 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FAM58AQ8N1B3 248 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 MTURNQ8N3F0 131 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 STPG2Q8N412 459 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C17orf78Q8N4C9 275 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ATPAF2Q8N5M1 289 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FAM83FQ8NEG4 500 aaPredicted RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 PRSS33Q8NF86 280 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR9Q2Q8NGE9 314 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR52B6Q8NGF0 335 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR9A2Q8NGT5 310 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 OR51A7Q8NH64 312 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C11orf45Q8TAV5 145 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 ZNF596Q8TC21 504 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 NEK7Q8TDX7 302 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 LRRC15Q8TF66 581 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 GLYATL2Q8WU03 294 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 FAM222BQ8WU58 562 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 PHF10Q8WUB8 498 aaKnown RBP2.66□□□□□ -1.98
USP28-210ENST00000542033 TCTEX1D2Q8WW35 142 aa2.66□□□□□ -1.98
USP28-210ENST00000542033 C1orf54Q8WWF1 131 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms