RNA–Protein interactions for RNA: ENST00000542002.5

YBX3-212, Transcript of Y-box binding protein 3, humanhuman

TSL 2

Gene YBX3, Length 952 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-212ENST00000542002 MSR1P21757 451 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 STOMP27105 288 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 GLRXP35754 106 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 UCP2P55851 309 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CBX1P83916 185 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 KHDRBS1Q07666 443 aaKnown RBP eCLIP8.37□□□□□ -1.07
YBX3-212ENST00000542002 RAB35Q15286 201 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 KCNMB1Q16558 191 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CLEC12BQ2HXU8 276 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 TMEM255AQ5JRV8 349 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CD300LDQ6UXZ3 194 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 DPPA2Q7Z7J5 298 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 ADCK1Q86TW2 530 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 ZBTB46Q86UZ6 589 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 GLB1L2Q8IW92 636 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 ZNF101Q8IZC7 436 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CYB561A3Q8NBI2 242 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 MAPK1IP1LQ8NDC0 245 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 SDR9C7Q8NEX9 313 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 OR10G2Q8NGC3 310 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 GIPC3Q8TF64 312 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 POP5Q969H6 163 aaKnown RBP8.37□□□□□ -1.07
YBX3-212ENST00000542002 SORCS2Q96PQ0 1159 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 TSSK6Q9BXA6 273 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 OR51B6Q9H340 312 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 CCNB1IP1Q9NPC3 277 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 RPRD1BQ9NQG5 326 aaKnown RBP8.37□□□□□ -1.07
YBX3-212ENST00000542002 ARMC1Q9NVT9 282 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 PDP1Q9P0J1 537 aaPredicted RBP8.37□□□□□ -1.07
YBX3-212ENST00000542002 F8P00451 2351 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 ZFHX3Q15911 3703 aa8.37□□□□□ -1.07
YBX3-212ENST00000542002 TEP1Q99973 2627 aaKnown RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 IQCMA0A1B0GVH7 501 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 C5orf49A4QMS7 147 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 C12orf71A8MTZ7 269 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SMAD7O15105 426 aaKnown RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 RER1O15258 196 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 IDH3BO43837 385 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 STAMBPO95630 424 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SNAP29O95721 258 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 F12P00748 615 aaPredicted RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 NGFP01138 241 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 PSKH1P11801 424 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 NR2C1P13056 603 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 CCNOP22674 350 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 NOS3P29474 1203 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 RASSF2P50749 326 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 HSF2Q03933 536 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 PLP2Q04941 152 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 RSPO1Q2MKA7 263 aaPredicted RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 CCDC92Q53HC0 331 aaPredicted RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 ZSCAN2Q7Z7L9 614 aaPredicted RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 SYT9Q86SS6 491 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 LNX2Q8N448 690 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 IQCF1Q8N6M8 205 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 ZNF525Q8N782 197 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SLC37A3Q8NCC5 494 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 OR10H5Q8NGA6 315 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SLC7A6Q92536 515 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 MRPL24Q96A35 216 aaKnown RBP8.36□□□□□ -1.07
YBX3-212ENST00000542002 C18orf12Q96KH6 178 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SNX18Q96RF0 628 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 SYT3Q9BQG1 590 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 NDEL1Q9GZM8 345 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 KCNN2Q9H2S1 579 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 DNAJB9Q9UBS3 223 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 FBXL3Q9UKT7 428 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 CMAHPQ9Y471 501 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 LHFPL6Q9Y693 200 aa8.36□□□□□ -1.07
YBX3-212ENST00000542002 IGHV4-30-2A0A087WSY4 118 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 A0A096LNT2 108 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 RNF223E7ERA6 249 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 GNGT2O14610 69 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 SYNGR3O43761 229 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 ENTPD5O75356 428 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 ADRA2AP08913 450 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 INHBBP09529 407 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 CLUP10909 449 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 FOSL1P15407 271 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 ZNF250P15622 560 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 GSTM3P21266 225 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 PCSK6P29122 969 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 PYCR1P32322 319 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 APLNRP35414 380 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 GGT2P36268 569 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 GUCA1AP43080 201 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 ALDH3B1P43353 468 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 CENPAP49450 140 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 EFNA4P52798 201 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 PCBD1P61457 104 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 LSM6P62312 80 aaKnown RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 HIST1H3AP68431 136 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 GALK2Q01415 458 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 COX10Q12887 443 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 MAD2L1BPQ15013 274 aaPredicted RBP8.35□□□□□ -1.07
YBX3-212ENST00000542002 TBC1D28Q2M2D7 210 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 SLC36A3Q495N2 470 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 HIST2H3PS2Q5TEC6 136 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 ACSM5Q6NUN0 579 aa8.35□□□□□ -1.07
YBX3-212ENST00000542002 CORO6Q6QEF8 472 aa8.35□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms