RNA–Protein interactions for RNA: ENST00000541578.5

SNHG1-217, Transcript of small nucleolar RNA host gene 1, humanhuman

TSL 3 BASIC

Gene SNHG1, Length 588 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG1-217ENST00000541578 SLC16A14Q7RTX9 510 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SLC26A11Q86WA9 606 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 NAXDQ8IW45 347 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 FBXO16Q8IX29 292 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SKA3Q8IX90 412 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 LIX1Q8N485 282 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 LINC00469Q8N7U9 141 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PPTC7Q8NI37 304 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 ZPLD1Q8TCW7 415 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SLC35B4Q969S0 331 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PPP1R14BQ96C90 147 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 NOL4LQ96MY1 436 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 TBX15Q96SF7 602 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 HIST1H4GQ99525 98 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SRXN1Q9BYN0 137 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 BLZF1Q9H2G9 400 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PTGES2Q9H7Z7 377 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PLGRKTQ9HBL7 147 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 LZTFL1Q9NQ48 299 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 INPP5EQ9NRR6 644 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PTTG3PQ9NZH4 202 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PDP1Q9P0J1 537 aaPredicted RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 B4GALT7Q9UBV7 327 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 DCDC2Q9UHG0 476 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 BTNL2Q9UIR0 455 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 CHTOPQ9Y3Y2 248 aaKnown RBP3.25□□□□□ -1.89
SNHG1-217ENST00000541578 V9GY05 133 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 DMDP11532 3685 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 SHROOM3Q8TF72 1996 aa3.25□□□□□ -1.89
SNHG1-217ENST00000541578 PLXNA4Q9HCM2 1894 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ADGRA3Q8IWK6 1321 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 NRCAMQ92823 1304 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF532Q9HCE3 1301 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 FASNP49327 2511 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 DLGAP1O14490 977 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 RAB29O14966 203 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 PHF1O43189 567 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CYTH3O43739 400 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CTAG2O75638 210 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 YEATS4O95619 227 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 S100A9P06702 114 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 S100A6P06703 90 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 U2AF2P26368 475 aaKnown RBP eCLIP3.24□□□□□ -1.892e-8■■■■□ 21.3
SNHG1-217ENST00000541578 GDF1P27539 372 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 FOXN2P32314 431 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 RORAP35398 523 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 NAA10P41227 235 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 YAP1P46937 504 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 P2RY4P51582 365 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CCNHP51946 323 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ERVPABLB-1P60509 514 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 YWHAGP61981 247 aaKnown RBP eCLIP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 BASP1P80723 227 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ARFRP1Q13795 201 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 AANATQ16613 207 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 DGUOKQ16854 277 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 NSUN5P1Q3KNT7 163 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CARD16Q5EG05 197 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 LCE3CQ5T5A8 94 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 THOC7Q6I9Y2 204 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 TTC23LQ6PF05 361 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 NIPA1Q7RTP0 329 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 VTCN1Q7Z7D3 282 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 MMAAQ8IVH4 418 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 MFSD6LQ8IWD5 586 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 EID2Q8N6I1 236 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 POM121L12Q8N7R1 296 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CATSPER1Q8NEC5 780 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 OR52I1Q8NGK6 324 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 PLPPR1Q8TBJ4 325 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CXorf40AQ8TE69 158 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 SDR42E1Q8WUS8 393 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CDKL2Q92772 493 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 DYNLL2Q96FJ2 89 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 SORT1Q99523 831 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ATP5SQ99766 215 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 BCL7BQ9BQE9 202 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 UQCC2Q9BRT2 126 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 TMEM59Q9BXS4 323 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 HES7Q9BYE0 225 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 SELENOIQ9C0D9 397 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 BATF3Q9NR55 127 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 GIN1Q9NXP7 522 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CLEC5AQ9NY25 188 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 ZNF581Q9P0T4 197 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 UXTQ9UBK9 157 aaPredicted RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 TBC1D24Q9ULP9 559 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 MMP17Q9ULZ9 603 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 GMEB1Q9Y692 573 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 TDRD15B5MCY1 1934 aaKnown RBP3.24□□□□□ -1.89
SNHG1-217ENST00000541578 CEP250Q9BV73 2442 aa3.24□□□□□ -1.89
SNHG1-217ENST00000541578 MYH9P35579 1960 aaKnown RBP3.23□□□□□ -1.89
SNHG1-217ENST00000541578 DOCK8Q8NF50 2099 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 GON4LQ3T8J9 2241 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 NSG1A0A0A6YYJ2 146 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 IGHV7-81A0A0B4J1V7 117 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 A0A1W2PPV9 198 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 K7ENP7 123 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 ATP8B1O43520 1251 aa3.23□□□□□ -1.89
SNHG1-217ENST00000541578 NMT2O60551 498 aa3.23□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 40.1 ms