RNA–Protein interactions for RNA: ENST00000541351.3

YBX3-211, Transcript of Y-box binding protein 3, humanhuman

TSL 4

Gene YBX3, Length 717 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-211ENST00000541351 CFAP157Q5JU67 520 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 LIPMQ5VYY2 423 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 FAM219BQ5XKK7 198 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 NCR3LG1Q68D85 454 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 TNFAIP8L2Q6P589 184 aaPredicted RBP7.73□□□□□ -1.17
YBX3-211ENST00000541351 LRRC74BQ6ZQY2 392 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 CCNYL1Q8N7R7 359 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 OR13G1Q8NGZ3 307 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 OR6S1Q8NH40 331 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 OR6X1Q8NH79 312 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 POM121L2Q96KW2 1035 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 DUSP26Q9BV47 211 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 CDCA4Q9BXL8 241 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 PRSS22Q9GZN4 317 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 SERTAD4Q9NUC0 356 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 SNX24Q9Y343 169 aa7.73□□□□□ -1.17
YBX3-211ENST00000541351 A0A087WUJ7 227 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 TCRBV4S1A1TA0A5B7 111 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 CDHR4A6H8M9 788 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 OR6A2O95222 327 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 NR2C1P13056 603 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 SAA4P35542 130 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 WNT5AP41221 380 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 PLAURQ03405 335 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 GALNTL6Q49A17 601 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 RFTN2Q52LD8 501 aaPredicted RBP7.72□□□□□ -1.17
YBX3-211ENST00000541351 RUNDC3AQ59EK9 446 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 INTS11Q5TA45 600 aaKnown RBP7.72□□□□□ -1.17
YBX3-211ENST00000541351 RNF165Q6ZSG1 346 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 RFPL4BQ6ZWI9 263 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 OLIG3Q7RTU3 272 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 HDDC2Q7Z4H3 204 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 Q8N2B8 174 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 IL17DQ8TAD2 202 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 ZNF420Q8TAQ5 688 aaPredicted RBP7.72□□□□□ -1.17
YBX3-211ENST00000541351 TMEM54Q969K7 222 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 COQ8BQ96D53 544 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 MAELQ96JY0 434 aaKnown RBP7.72□□□□□ -1.17
YBX3-211ENST00000541351 MEGF10Q96KG7 1140 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 C4orf45Q96LM5 186 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 PCDHAC1Q9H158 963 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 INPP5EQ9NRR6 644 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 CALML5Q9NZT1 146 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 SELENONQ9NZV5 590 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 ONECUT1Q9UBC0 465 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 PITPNC1Q9UKF7 332 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 ZNF232Q9UNY5 417 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 HIF3AQ9Y2N7 669 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 CCL27Q9Y4X3 112 aa7.72□□□□□ -1.17
YBX3-211ENST00000541351 TRAV38-1A0A0B4J264 116 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 GMNCA6NCL1 334 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 MS4A18H0YCH9 400 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 ADAM20O43506 726 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SERPINI2O75830 405 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 ABHD16AO95870 558 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 GKN3PP0CG01 181 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 RPS4Y1P22090 263 aaKnown RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 ECHS1P30084 290 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 CHI3L1P36222 383 aaPredicted RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 ACAA2P42765 397 aaKnown RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 GUCA1AP43080 201 aaPredicted RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 VDAC2P45880 294 aaPredicted RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 UBE2E1P51965 193 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 BIDP55957 195 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 PCBD1P61457 104 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 MS4A18Q3C1V0 323 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 BTN2A1Q7KYR7 527 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 HMGN2P46Q86SG4 172 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 MOGAT3Q86VF5 341 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 LRRC18Q8N456 261 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 OR5AU1Q8NGC0 362 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 OR4X2Q8NGF9 303 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 TFAP2CQ92754 450 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 TAAR8Q969N4 342 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SLC35B4Q969S0 331 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SLC25A44Q96H78 314 aaPredicted RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 PPP3R2Q96LZ3 170 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 ZNF607Q96SK3 696 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 NAPGQ99747 312 aaPredicted RBP7.71□□□□□ -1.18
YBX3-211ENST00000541351 MEGF9Q9H1U4 602 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SEMA6AQ9H2E6 1030 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 GSTO2Q9H4Y5 243 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SIAEQ9HAT2 523 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 SMAD5-AS1Q9Y6J3 95 aa7.71□□□□□ -1.18
YBX3-211ENST00000541351 PCLOQ9Y6V0 5065 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 MEGF11A6BM72 1044 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 RNASET2O00584 256 aaKnown RBP7.7□□□□□ -1.18
YBX3-211ENST00000541351 IGHG1P01857 330 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 MMP7P09237 267 aaPredicted RBP7.7□□□□□ -1.18
YBX3-211ENST00000541351 SBK3P0C264 359 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 NR2F1P10589 423 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 HLA-DOBP13765 273 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 TCP1P17987 556 aaKnown RBP7.7□□□□□ -1.18
YBX3-211ENST00000541351 CLRN1P58418 232 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 EGR4Q05215 589 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 BLMHQ13867 455 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 TMEM255AQ5JRV8 349 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 RNF220Q5VTB9 566 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 LYPD2Q6UXB3 125 aa7.7□□□□□ -1.18
YBX3-211ENST00000541351 NUDCD3Q8IVD9 361 aa7.7□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms