RNA–Protein interactions for RNA: ENST00000540960.1

CHD4-208, Transcript of chromodomain helicase DNA binding protein 4, humanhuman

TSL 5

Gene CHD4, Length 892 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD4-208ENST00000540960 RASGEF1BQ0VAM2 473 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PMPCAQ10713 525 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 FOXF1Q12946 379 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 SSX1Q16384 188 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ACKR1Q16570 336 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 CDONQ4KMG0 1287 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 THEM4Q5T1C6 240 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 TMEM225Q6GV28 225 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 SLC18B1Q6NT16 456 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 POMZP3Q6PJE2 187 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 DEGS2Q6QHC5 323 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PAQR6Q6TCH4 344 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 VASH1Q7L8A9 365 aaPredicted RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 BCDIN3DQ7Z5W3 292 aaKnown RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZBTB46Q86UZ6 589 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 LIX1LQ8IVB5 337 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 CYB561A3Q8NBI2 242 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF485Q8NCK3 441 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 BBS1Q8NFJ9 593 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF417Q8TAU3 575 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 NDNFQ8TB73 568 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 RND1Q92730 232 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 KISS1RQ969F8 398 aaPredicted RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 Q96M85 177 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 OXGR1Q96P68 337 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF587Q96SQ5 575 aaPredicted RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 INTS14Q96SY0 518 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PTDSS2Q9BVG9 487 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 SF3B5Q9BWJ5 86 aaKnown RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 SLITRK2Q9H156 845 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 OR51E2Q9H255 320 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 WDR76Q9H967 626 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 MARCH7Q9H992 704 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 SH2D2AQ9NP31 389 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 PAQR5Q9NXK6 330 aaPredicted RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 GALNT8Q9NY28 637 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 TAS2R5Q9NYW4 299 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 KLHL9Q9P2J3 617 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 LAMP5Q9UJQ1 280 aa7.43□□□□□ -1.22
CHD4-208ENST00000540960 ZNF346Q9UL40 294 aaKnown RBP7.43□□□□□ -1.22
CHD4-208ENST00000540960 A0A1W2PQL4 384 aaPredicted RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 OR6C68A6NDL8 312 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 METTL15A6NJ78 407 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 J3QLW9 94 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 SULT2B1O00204 365 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 CASKO14936 926 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 OGG1O15527 345 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 GPX5O75715 221 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 IGHG1P01857 330 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 CELA2AP08217 269 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 ZNF19P17023 458 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 SDC2P34741 201 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 PTGDSP41222 190 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 CDKN2AP42771 156 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 BMXP51813 675 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 PPP5CP53041 499 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 OR2B6P58173 313 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 DEFA1P59665 94 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 DEFA3P59666 94 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 LSM3P62310 102 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 OC90Q02509 493 aaPredicted RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 AQP6Q13520 282 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 OR7A5Q15622 319 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 YIF1BQ5BJH7 314 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 TEX30Q5JUR7 227 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 RNFT1Q5M7Z0 435 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 DDI2Q5TDH0 399 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 OR2G6Q5TZ20 316 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 TMPPEQ6ZT21 453 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 RHOUQ7L0Q8 258 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 CD163Q86VB7 1156 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 KLBQ86Z14 1044 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 WDSUB1Q8N9V3 476 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 ZNF519Q8TB69 540 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 SLC25A46Q96AG3 418 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 NTNG2Q96CW9 530 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 ZMYND19Q96E35 227 aaPredicted RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 TSPAN32Q96QS1 320 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 FAM173AQ9BQD7 235 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 RTN4RQ9BZR6 473 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 SLIRPQ9GZT3 109 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 COMMD4Q9H0A8 199 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 NIPAL2Q9H841 368 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 MED20Q9H944 212 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 GALNT9Q9HCQ5 603 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 RPRD1BQ9NQG5 326 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 TXNL4BQ9NX01 149 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 QPCTLQ9NXS2 382 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 TAS2R16Q9NYV7 291 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 VDAC3Q9Y277 283 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 KLF13Q9Y2Y9 288 aaPredicted RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 ADAM18Q9Y3Q7 739 aa7.42□□□□□ -1.22
CHD4-208ENST00000540960 PRKDCP78527 4128 aaKnown RBP7.42□□□□□ -1.22
CHD4-208ENST00000540960 TRAV1-2A0A0B4J238 106 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 SLC22A23A1A5C7 686 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 MBD3L4A6NDZ8 208 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 MBD3L5A6NJ08 208 aaPredicted RBP7.41□□□□□ -1.22
CHD4-208ENST00000540960 C11orf98E9PRG8 122 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 KLRC4-KLRK1H3BQV0 150 aa7.41□□□□□ -1.22
CHD4-208ENST00000540960 GMFGO60234 142 aa7.41□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms