RNA–Protein interactions for RNA: ENST00000540931.1

CLSTN3-210, Transcript of calsyntenin 3, humanhuman

TSL 2

Gene CLSTN3, Length 910 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN3-210ENST00000540931 CPOQ8IVL8 374 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 SKA3Q8IX90 412 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 TCEANCQ8N8B7 351 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 SLC26A10Q8NG04 563 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 PTP4A1Q93096 173 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 OTULINQ96BN8 352 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 ZC3HAV1LQ96H79 300 aaKnown RBP15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 MNTQ99583 582 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 SPEF1Q9Y4P9 236 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 C2CD3Q4AC94 2353 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 APCP25054 2843 aa15.29■□□□□ 0.04
CLSTN3-210ENST00000540931 FBN2P35556 2912 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 IGKV1D-43A0A0B4J1Z2 117 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 IGLV1-44P01699 117 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 SERPINA5P05154 406 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 THBDP07204 575 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 CD3EP07766 207 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 CDAP32320 146 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 RPS7P62081 194 aaKnown RBP15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 ZIK1Q3SY52 487 aaPredicted RBP15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 NCMAPQ5T1S8 102 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 PLBD1Q6P4A8 553 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 LRRC18Q8N456 261 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 OR6K6Q8NGW6 343 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 FAM81AQ8TBF8 368 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 HAO2Q9NYQ3 351 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 NKX1-2Q9UD57 310 aaPredicted RBP15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 WARS2Q9UGM6 360 aaKnown RBP15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 TMEM14AQ9Y6G1 99 aa15.28■□□□□ 0.04
CLSTN3-210ENST00000540931 E9PQ18 207 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 GAAP10253 952 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 PRF1P14222 555 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 GSTT1P30711 240 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 ADAM8P78325 824 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 ETFDHQ16134 617 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 OCLNQ16625 522 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 KLHL12Q53G59 568 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 ZNF454Q8N9F8 522 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 OR4F15Q8NGB8 312 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 OR9Q1Q8NGQ5 310 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 C11orf40Q8WZ69 217 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 TSSK2Q96PF2 358 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 SH3GL3Q99963 347 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 ZNF416Q9BWM5 594 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 OR51V1Q9H2C8 321 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 MARCH7Q9H992 704 aa15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 HINT3Q9NQE9 182 aaKnown RBP15.27■□□□□ 0.04
CLSTN3-210ENST00000540931 FAM221AA4D161 298 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 M0R1B8 84 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 DCTN6O00399 190 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 PRKYO43930 277 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 SEC14L2O76054 403 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 HLA-HP01893 362 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 TUBG1P23258 451 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 CD40P25942 277 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 EPHA2P29317 976 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 APLNRP35414 380 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 POLR2IP36954 125 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 ENTPD1P49961 510 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 NUDT6P53370 316 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 TBC1D28Q2M2D7 210 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 MEPCEQ7L2J0 689 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 MDP1Q86V88 176 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 MARVELD3Q96A59 401 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 PLPPR2Q96GM1 343 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 DCLRE1CQ96SD1 692 aaKnown RBP15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 INTS14Q96SY0 518 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 MBOAT4Q96T53 435 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 TEAD3Q99594 435 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 HDHD2Q9H0R4 259 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 TUBG2Q9NRH3 451 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 CLN6Q9NWW5 311 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 FBXO9Q9UK97 447 aaPredicted RBP15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 RNF115Q9Y4L5 304 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 PCDHGB1Q9Y5G3 927 aa15.26■□□□□ 0.03
CLSTN3-210ENST00000540931 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 FAM183AA6NL82 134 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 J3QW42 95 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 PHYHO14832 338 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 SGCEO43556 437 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 APOC1P02654 83 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 MMP7P09237 267 aaPredicted RBP15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF32P17041 273 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 CAPGP40121 348 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 VHLP40337 213 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 SLC15A1P46059 708 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ZNF83P51522 516 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 GALK2Q01415 458 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 TLE4Q04727 773 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ENDOGQ14249 297 aaKnown RBP15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 PCK2Q16822 640 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 AADACL4Q5VUY2 407 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ADAM5Q6NVV9 412 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 CYGBQ8WWM9 190 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 COG8Q96MW5 612 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 IL4I1Q96RQ9 567 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 ADI1Q9BV57 179 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 OR2H1Q9GZK4 316 aa15.25■□□□□ 0.03
CLSTN3-210ENST00000540931 YIPF3Q9GZM5 350 aa15.25■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms