RNA–Protein interactions for RNA: ENST00000540812.1

TRIM65-203, Transcript of tripartite motif containing 65, humanhuman

TSL 2

Gene TRIM65, Length 385 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM65-203ENST00000540812 J3QLI3 93 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 SPRY1O43609 319 aaPredicted RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 NGFP01138 241 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 EGR1P18146 543 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 LAP3P28838 519 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 PRDX6P30041 224 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 MBNL2Q5VZF2 373 aaKnown RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 C3orf56Q8N813 242 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 ZDHHC22Q8N966 263 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 GEMIN6Q8WXD5 167 aaKnown RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 RCN3Q96D15 328 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 CCT8L2Q96SF2 557 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 GAL3ST1Q99999 423 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 ECSITQ9BQ95 431 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 ALG12Q9BV10 488 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 OR2H1Q9GZK4 316 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 POLR2J2Q9GZM3 115 aaKnown RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 POLR2J3Q9H1A7 115 aaKnown RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 EFCAB1Q9HAE3 211 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 DCAF16Q9NXF7 216 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 EIF3KQ9UBQ5 218 aaKnown RBP13.76□□□□□ -0.21
TRIM65-203ENST00000540812 AP3M1Q9Y2T2 418 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 MED31Q9Y3C7 131 aa13.76□□□□□ -0.21
TRIM65-203ENST00000540812 MEGF8Q7Z7M0 2845 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 ISPDA4D126 451 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 NPIPB13A6NJU9 1138 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 NPIPB4C9JG80 1138 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 WIPF1O43516 503 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 FAM107AO95990 144 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 FSHBP01225 129 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 PPP1CBP62140 327 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 LCN2P80188 198 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 ALG10Q5BKT4 473 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 FAM27BQ5VT28 67 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 IGFN1Q86VF2 1251 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 NANPQ8TBE9 248 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 C22orf15Q8WYQ4 148 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 ZNF583Q96ND8 569 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 JMJD8Q96S16 334 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 HOPXQ9BPY8 73 aaPredicted RBP13.75□□□□□ -0.21
TRIM65-203ENST00000540812 SUCNR1Q9BXA5 334 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 C7orf69Q9H7B7 122 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 MSL2Q9HCI7 577 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 UBAP1Q9NZ09 502 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 HIF3AQ9Y2N7 669 aa13.75□□□□□ -0.21
TRIM65-203ENST00000540812 PLSCR5A0PG75 271 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 DCTN3O75935 186 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 PRSS23O95084 383 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 CST2P09228 141 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 ZFP36P26651 326 aaKnown RBP13.74□□□□□ -0.21
TRIM65-203ENST00000540812 RPL27P61353 136 aaKnown RBP13.74□□□□□ -0.21
TRIM65-203ENST00000540812 CYBRD1Q53TN4 286 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 ZNF774Q6NX45 483 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 HACD2Q6Y1H2 254 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 ARPINQ7Z6K5 226 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 MICU2Q8IYU8 434 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 BPIFB2Q8N4F0 458 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 LRRC75AQ8NAA5 344 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 EGLN1Q9GZT9 426 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 POFUT1Q9H488 388 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 KLHL21Q9UJP4 597 aa13.74□□□□□ -0.21
TRIM65-203ENST00000540812 IGHMP01871 453 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 SCG5P05408 212 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 ADH4P08319 380 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 THRBP10828 461 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 IFI30P13284 250 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 LIMS1P48059 325 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 CTXN1P60606 82 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 ENDOGQ14249 297 aaKnown RBP13.73□□□□□ -0.21
TRIM65-203ENST00000540812 TAF11Q15544 211 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 LRRC23Q53EV4 343 aaPredicted RBP13.73□□□□□ -0.21
TRIM65-203ENST00000540812 AWAT1Q58HT5 328 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 C8orf82Q6P1X6 216 aaPredicted RBP13.73□□□□□ -0.21
TRIM65-203ENST00000540812 ERICH5Q6P6B1 374 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 FOXL2NBQ6ZUU3 175 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 ZMYND19Q96E35 227 aaPredicted RBP13.73□□□□□ -0.21
TRIM65-203ENST00000540812 C4orf45Q96LM5 186 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 RBP7Q96R05 134 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 CYSLTR2Q9NS75 346 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 A4GNTQ9UNA3 340 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 TIMM10BQ9Y5J6 103 aa13.73□□□□□ -0.21
TRIM65-203ENST00000540812 PKD1L1Q8TDX9 2849 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 TRAV27A0A087WT01 109 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 A0A1W2PPL8 197 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 H3BSA7 217 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 H7C1C5 153 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 NDUFAB1O14561 156 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 ICMTO60725 284 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 IGHV2-70P01814 119 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 CD55P08174 381 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 NR2C1P13056 603 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 GATA3P23771 443 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 LCN6P62502 163 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 UBA52P62987 128 aaKnown RBP13.72□□□□□ -0.21
TRIM65-203ENST00000540812 SLC3A1Q07837 685 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 PSG7Q13046 419 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 FHL1Q13642 323 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 MTX3Q5HYI7 312 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 UNQ6126/PRO20091Q6UXV3 157 aa13.72□□□□□ -0.21
TRIM65-203ENST00000540812 OR51A7Q8NH64 312 aa13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms