RNA–Protein interactions for RNA: ENST00000540010.1

TRAF1-202, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 4,303 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-202ENST00000540010 HOXC12P31275 282 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TRHRP34981 398 aaPredicted RBP9.07□□□□□ -0.96
TRAF1-202ENST00000540010 BTG2P78543 158 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CEBPEQ15744 281 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 COMTD1Q86VU5 262 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SULF2Q8IWU5 870 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF611Q8N823 705 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 STK35Q8TDR2 534 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 GLYATL2Q8WU03 294 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 UPRTQ96BW1 309 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 BORCS8Q96FH0 119 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SYT3Q9BQG1 590 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 A0A087WV62 115 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SULT2B1O00204 365 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 IFNA5P01569 189 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CT62P0C5K7 136 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 EPXP11678 715 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SPI1P17947 270 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PTBP1P26599 531 aaKnown RBP eCLIP9.07□□□□□ -0.96
TRAF1-202ENST00000540010 RPS27AP62979 156 aaKnown RBP9.07□□□□□ -0.96
TRAF1-202ENST00000540010 UBA52P62987 128 aaKnown RBP9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TIGD3Q6B0B8 471 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 MARCH3Q86UD3 253 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF595Q8IYB9 648 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ADAMTS18Q8TE60 1221 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 DDIT4LQ96D03 193 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 LRRC46Q96FV0 321 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 EMC6Q9BV81 110 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PRDM6Q9NQX0 595 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TRAPPC4Q9Y296 219 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CTNSO60931 367 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 DBHP09172 617 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 EPHA1P21709 976 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PLGLB1Q02325 96 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 HNF4GQ14541 408 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CDK5R1Q15078 307 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 LYSMD4Q5XG99 296 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 LAIR1Q6GTX8 287 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM88Q6PEY1 159 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TEX261Q6UWH6 196 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 OR5L2Q8NGL0 311 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SCARB1Q8WTV0 552 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 GPR27Q9NS67 375 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 STEAP1Q9UHE8 339 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 U3KQ87 197 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CACNA1DQ01668 2161 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 A0A1W2PPC1 479 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 NSA2O95478 260 aaKnown RBP9.07□□□□□ -0.96
TRAF1-202ENST00000540010 IFNA2P01563 188 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PMP2P02689 132 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ATF1P18846 271 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CD79BP40259 229 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 LIMS1P48059 325 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 NPY4RP50391 375 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 S100A12P80511 92 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PEA15Q15121 130 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 PRICKLE4Q2TBC4 344 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 FAM57BQ71RH2 274 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 NLRC3Q7RTR2 1065 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 TCTE3Q8IZS6 198 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ZFP82Q8N141 532 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 OR4D6Q8NGJ1 314 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SMIM19Q96E16 107 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SORCS2Q96PQ0 1159 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ABHD1Q96SE0 405 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CRB3Q9BUF7 120 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 SLC25A19Q9HC21 320 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 B3GAT2Q9NPZ5 323 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 CYSLTR2Q9NS75 346 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 C20orf141Q9NUB4 165 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 IL20Q9NYY1 176 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 MOKQ9UQ07 419 aa9.07□□□□□ -0.96
TRAF1-202ENST00000540010 ZNF318Q5VUA4 2279 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SEMA7AO75326 666 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 CD3DP04234 171 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 INHBBP09529 407 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 IFNGR1P15260 489 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PI3P19957 117 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 TAS2R31P59538 309 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RIPPLY1Q0D2K3 151 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 GLYR1Q49A26 553 aaPredicted RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SLC2A12Q8TD20 617 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 FBLIM1Q8WUP2 373 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 APOBEC4Q8WW27 367 aaKnown RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 ANKRD9Q96BM1 317 aaPredicted RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 BARHL1Q9BZE3 327 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 CUTCQ9NTM9 273 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 FBXO34Q9NWN3 711 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SLC22A13Q9Y226 551 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SPTBN2O15020 2390 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 SUSD5O60279 629 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 STK17BO94768 372 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 DAP3P51398 398 aaKnown RBP9.06□□□□□ -0.96
TRAF1-202ENST00000540010 FZD5Q13467 585 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 RAB3CQ96E17 227 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 STACQ99469 402 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM59Q9BXS4 323 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 POFUT1Q9H488 388 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 TMEM231Q9H6L2 316 aa9.06□□□□□ -0.96
TRAF1-202ENST00000540010 PLEKHB1Q9UF11 243 aaPredicted RBP9.06□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 42 ms