RNA–Protein interactions for RNA: ENST00000539533.3

PCDHB17P-201, Transcript of protocadherin beta 17 pseudogene, humanhuman

BASIC

Gene PCDHB17P, Length 2,393 nt, Biotype transcribed unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDHB17P-201ENST00000539533 A0A1B0GVI7 797 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A1W2PPB8 328 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A1W2PRS3 328 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 KIR3DP1A8MWS1 328 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR6A2O95222 327 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 IFNA7P01567 189 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 H2AFB2P0C5Z0 115 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SULT1A3P0DMM9 295 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SULT1A4P0DMN0 295 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SNRPBP14678 240 aaKnown RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SSTR2P30874 369 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 DNASE1L1P49184 302 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 RAG2P55895 527 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 PITPNAQ00169 270 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 HSF2Q03933 536 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 CAMK2DQ13557 499 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 LGALSLQ3ZCW2 172 aaPredicted RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 DMKNQ6E0U4 476 aaPredicted RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 TEX19Q8NA77 164 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 BEST4Q8NFU0 473 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR1J4Q8NGS1 313 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR13C5Q8NGS8 318 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 MFSD8Q8NHS3 518 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SMPDL3BQ92485 455 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 GHSRQ92847 366 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 UBQLN2Q9UHD9 624 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 DCTN6O00399 190 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 TM4SF5O14894 197 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 HLA-DOBP13765 273 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 ATF1P18846 271 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 CSRP1P21291 193 aaKnown RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SDHBP21912 280 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 PYCR1P32322 319 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF81P51508 661 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 PON3Q15166 354 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 ACKR1Q16570 336 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 BTN2A1Q7KYR7 527 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR6K6Q8NGW6 343 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 DACT3Q96B18 629 aaPredicted RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SRA1Q9HD15 236 aaKnown RBP15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 SERINC1Q9NRX5 453 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 GVINP1Q7Z2Y8 2422 aa15.29■□□□□ 0.04
PCDHB17P-201ENST00000539533 MS4A18H0YCH9 400 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 MT-ND4P03905 459 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 LIFP15018 202 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 DPP4P27487 766 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 NAA10P41227 235 aaPredicted RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 OC90Q02509 493 aaPredicted RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 MYBPHQ13203 477 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 MS4A18Q3C1V0 323 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 EMC4Q5J8M3 183 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ATP1A1-AS1Q5TC04 95 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 FGD2Q7Z6J4 655 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 PIAS4Q8N2W9 510 aaPredicted RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 MS4A15Q8N5U1 240 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 SMAD5Q99717 465 aaKnown RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 C7orf50Q9BRJ6 194 aaKnown RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 POTEKPQ9BYX7 375 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 PPA2Q9H2U2 334 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ASCL3Q9NQ33 180 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 DLL4Q9NR61 685 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A1W2PRG6 482 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 LIPT2A6NK58 231 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 SSNA1O43805 119 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 TFP02787 698 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 P04436 131 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 HOXD4P09016 255 aaPredicted RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 RRASP10301 218 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 DNASE1P24855 282 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 CYB561P49447 251 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 DIO1P49895 249 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 NOVA1P51513 510 aaKnown RBP15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 MAP2K6P52564 334 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 C3orf33Q6P1S2 294 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ESPNLQ6ZVH7 1005 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ASCL5Q7RTU5 278 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 RFLNBQ8N5W9 214 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 EXD3Q8N9H8 876 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 OR6S1Q8NH40 331 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 SLC39A7Q92504 469 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 FAM117AQ9C073 453 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 BRD7Q9NPI1 651 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ABRACLQ9P1F3 81 aa15.28■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZFHX4Q86UP3 3567 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 TRAV1-2A0A0B4J238 106 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A1W2PNR3 127 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 A0A1W2PPK0 400 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 TRABD2BA6NFA1 517 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 ZNF593O00488 134 aaPredicted RBP15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 AKR7A3O95154 331 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 MPC2O95563 127 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 EPXP11678 715 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 CEACAM1P13688 526 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 ITGA3P26006 1051 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 SFTPDP35247 375 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 EIF1P41567 113 aaKnown RBP15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 GPR85P60893 370 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 LGALS3BPQ08380 585 aa15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 SNTB2Q13425 540 aaKnown RBP15.27■□□□□ 0.04
PCDHB17P-201ENST00000539533 KLF9Q13886 244 aaPredicted RBP15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms